RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-204ENST00000394601 XKRYO14609 159 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 EFNA2O43921 213 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 CYB5AP00167 134 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 GLB1P16278 677 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 SLC18B1Q6NT16 456 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 WDR74Q6RFH5 385 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-204ENST00000394601 STX12Q86Y82 276 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 PLXDC1Q8IUK5 500 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 CLEC1AQ8NC01 280 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 SLC26A10Q8NG04 563 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 FAM3DQ96BQ1 224 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 CMBLQ96DG6 245 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 SMCO4Q9NRQ5 59 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 UFSP2Q9NUQ7 469 aa13.81□□□□□ -0.2
PTBP1-204ENST00000394601 COA3Q9Y2R0 106 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-204ENST00000394601 LRP3O75074 770 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 NUDT14O95848 222 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 FOSL2P15408 326 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 FSTP19883 344 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 S100A2P29034 98 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 CALCRP30988 508 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 UNQ6494/PRO21346Q6UXR6 183 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 MISPQ8IVT2 679 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 GABRG1Q8N1C3 465 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 OR10D4PQ8NGN7 298 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 GGACTQ9BVM4 153 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 RGCCQ9H4X1 137 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 COPS7AQ9UBW8 275 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 COL6A3P12111 3177 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 C2orf72A6NCS6 295 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 COLCA2A8K830 154 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 C9JQL5 133 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 TIAF1O95411 115 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 SLC26A5P58743 744 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 FMODQ06828 376 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 ZP4Q12836 540 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 SMAD4Q13485 552 aaKnown RBP13.8□□□□□ -0.2
PTBP1-204ENST00000394601 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 BAP18Q8IXM2 172 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 OR51A2Q8NGJ7 313 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 C15orf40Q8WUR7 153 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 DNASE2BQ8WZ79 361 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 SGK3Q96BR1 496 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 FOXRED1Q96CU9 486 aaPredicted RBP13.8□□□□□ -0.2
PTBP1-204ENST00000394601 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
PTBP1-204ENST00000394601 LOC100289279A0A1B0GTE1 492 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 SOX15O60248 233 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 LMX1BO60663 402 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 SFTPBP07988 381 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 SPARCP09486 303 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TPT1P13693 172 aaKnown RBP13.79□□□□□ -0.2
PTBP1-204ENST00000394601 FBXW4P57775 412 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TSC22D1Q15714 1073 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-204ENST00000394601 LRP11Q86VZ4 500 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TMEM104Q8NE00 496 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 OR4K17Q8NGC6 315 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 GPX8Q8TED1 209 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 NRIP2Q9BQI9 281 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 FGF21Q9NSA1 209 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 PUS1Q9Y606 427 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTBP1-204ENST00000394601 LOC390937A0A1W2PQ73 354 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 RNASEK-C17orf49H0YIS7 233 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 DUX1O43812 170 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 HLA-DQA1Q5Y7H0 255 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 OR52N5Q8NH56 324 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 B3GALT1Q9Y5Z6 326 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 CABIN1Q9Y6J0 2220 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 NME2P1O60361 137 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 ADAP1O75689 374 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 ISG15P05161 165 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 PPM1FP49593 454 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-204ENST00000394601 KIAA0141Q14154 515 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TOMM20Q15388 145 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TDHQ8IZJ6 230 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 OR5AP2Q8NGF4 316 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 CST11Q9H112 138 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 TAS2R4Q9NYW5 299 aa13.79□□□□□ -0.2
PTBP1-204ENST00000394601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 C5orf52A6NGY3 159 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 ZNF736B4DX44 427 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-204ENST00000394601 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 CSF1P09603 554 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 JMJD7P0C870 316 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 OR6N1Q8NGY5 312 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 ATG101Q9BSB4 218 aa13.78□□□□□ -0.2
PTBP1-204ENST00000394601 TOLLIPQ9H0E2 274 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms