RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CSNK1A1LQ8N752 337 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 GRHL3Q8TE85 626 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 C2orf15Q8WU43 125 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 CDS1Q92903 461 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TNFRSF13CQ96RJ3 184 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 NRTNQ99748 197 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 NMNAT2Q9BZQ4 307 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 SIGLEC7Q9Y286 467 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 HOXB2P14652 356 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 HIST1H1CP16403 213 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 BMI1P35226 326 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 RAB11BQ15907 218 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 GLB1LQ6UWU2 654 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 ADIPOR2Q86V24 386 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 OR4K15Q8NH41 348 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF845Q96IR2 970 aaPredicted RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 SPACA7Q96KW9 195 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 FRRS1LQ9P0K9 344 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TCFL5Q9UL49 500 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 YLPM1P49750 1951 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TAAR5O14804 337 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF708P17019 499 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 ERVS71-1P61550 626 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 TBPL1P62380 186 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 FKBP1AP62942 108 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 TRAPPC6BQ86SZ2 158 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 TTC9BQ8N6N2 239 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF676Q8N7Q3 588 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CHST4Q8NCG5 386 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 ARHGDIGQ99819 225 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 ZDHHC3Q9NYG2 299 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 LAMP3Q9UQV4 416 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 TRDCB7Z8K6 153 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 PLPP1O14494 284 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CD160O95971 181 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 PPBPP02775 128 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 IFNA6P05013 189 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 NCBP2P52298 156 aaKnown RBP eCLIP11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 UCP2P55851 309 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 FAM3AP98173 230 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 MPV17LQ2QL34 196 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 DCXRQ7Z4W1 244 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 OR14L1PQ8NHC6 308 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CCDC74AQ96AQ1 378 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 KXD1Q9BQD3 176 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 PCED1AQ9H1Q7 454 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 KLHL28Q9NXS3 571 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 VAX2Q9UIW0 290 aa11.17□□□□□ -0.62
SLC28A1-203ENST00000394573 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 LOC100289279A0A1B0GTE1 492 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 A6NJ64 397 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 AQP7P3A6NL99 342 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 A8MVM7 634 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 ZIC2O95409 532 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 FPR2P25090 351 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 RPL19P84098 196 aaKnown RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 TGM3Q08188 693 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 PMPCAQ10713 525 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 OGFOD3Q6PK18 319 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 MDGA2Q7Z553 956 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 BPIFA2Q96DR5 249 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 LYSMD1Q96S90 227 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 NMNAT3Q96T66 252 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 CMKLR1Q99788 373 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 SLC26A1Q9H2B4 701 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF430Q9H8G1 570 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 IKZF2Q9UKS7 526 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 KLHDC2Q9Y2U9 406 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 SCN8AQ9UQD0 1980 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 NPIPB15A6NHN6 443 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 H7C4K7 107 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 KAT7O95251 611 aa11.16□□□□□ -0.62
SLC28A1-203ENST00000394573 SERPINA4P29622 427 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms