RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CPA3P15088 417 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IL9P15248 144 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AREGP15514 252 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GNSP15586 552 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CBR1P16152 277 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC25A16P16260 332 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HIST1H1CP16403 213 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ABOP16442 354 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCL3L1P16619 93 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CD36P16671 472 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF24P17028 368 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF25P17030 456 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ERCC2P18074 760 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IL1RNP18510 177 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PDE6GP18545 87 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SDC1P18827 310 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATF1P18846 271 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATF3P18847 181 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TSPAN8P19075 237 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 POLR2CP19387 275 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SRMP19623 302 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CSNK2A2P19784 350 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CXCL2P19875 107 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CXCL3P19876 107 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TCN1P20061 433 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCNA2P20248 432 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAB3AP20336 220 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAB3BP20337 219 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAB4AP20338 218 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAB5AP20339 215 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TAC1P20366 129 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GZMHP20718 246 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CASTP20810 708 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SERPINA2P20848 420 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CNR1P21554 472 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PAICSP22234 425 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SPRR1BP22528 89 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CPN2P22792 545 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PPIBP23284 216 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ME2P23368 584 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AHCYP23526 432 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NPPCP23582 126 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GABRR1P24046 479 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCND1P24385 295 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CRHBPP24387 322 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CD24P25063 80 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATP5A1P25705 553 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PSMA1P25786 263 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PSMA2P25787 234 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CTNNA2P26232 953 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 U2AF2P26368 475 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PTBP1P26599 531 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FKBP2P26885 142 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 STOMP27105 288 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HLA-DMAP28067 261 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HLA-DMBP28068 263 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HTR1DP28221 377 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HTR2AP28223 471 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TMOD1P28289 359 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HOXD10P28358 340 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LAP3P28838 519 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IMPA1P29218 277 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IL12AP29459 219 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IL12BP29460 328 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MARCKSP29966 332 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GNA11P29992 359 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PBLDP30039 288 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRDX3P30048 256 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PPP2R1AP30153 589 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PPP2R1BP30154 601 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCND3P30281 292 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MIPP30301 263 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC6A1P30531 599 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TSPOP30536 169 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GRPRP30550 384 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SRIP30626 198 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GCH1P30793 250 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 OR10J1P30954 320 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LCN1P31025 176 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FGF9P31371 208 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AKT1P31749 480 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SFNP31947 248 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRDX2P32119 198 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCR1P32246 355 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FOXN2P32314 431 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RPL9P32969 192 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MAN1A1P33908 653 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GABRA3P34903 492 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MPIP34949 423 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PFN2P35080 140 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SPRP35270 261 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GCKP35557 465 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 COPB2P35606 906 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GGT2P36268 569 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATP5C1P36542 298 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SERPINB5P36952 375 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HSD17B3P37058 310 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HSD17B2P37059 387 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PPARGP37231 505 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HPCAL1P37235 193 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms