RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 BTN1A1Q13410 526 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 SFRP5Q5T4F7 317 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 CDC20BQ86Y33 519 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 SLC26A10Q8NG04 563 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 HAVCR1Q96D42 359 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 OR2A7Q96R45 310 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 KCNG2Q9UJ96 466 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 KLHDC2Q9Y2U9 406 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 ATRXP46100 2492 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TMEM127O75204 238 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TSPAN9O75954 239 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 NR2C1P13056 603 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 ZNF823P16415 610 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 CTRB1P17538 263 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 LAP3P28838 519 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 S100A11P31949 105 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TAS2R20P59543 309 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 RNPS1Q15287 305 aaKnown RBP10.93□□□□□ -0.66
CIITA-202ENST00000381835 CTRB2Q6GPI1 263 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 RGS7BPQ6MZT1 257 aaPredicted RBP10.93□□□□□ -0.66
CIITA-202ENST00000381835 SLC25A47Q6Q0C1 308 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 ALKAL2Q6UX46 152 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 CISD2Q8N5K1 135 aaKnown RBP10.93□□□□□ -0.66
CIITA-202ENST00000381835 Q8NA96 180 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 OR52B4Q8NGK2 314 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 C15orf40Q8WUR7 153 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TMEM54Q969K7 222 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 TRIB1Q96RU8 372 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 UQCC2Q9BRT2 126 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 RBM24Q9BX46 236 aaKnown RBP10.93□□□□□ -0.66
CIITA-202ENST00000381835 ULBP2Q9BZM5 246 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 PFDN2Q9UHV9 154 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 FOXD3Q9UJU5 478 aaPredicted RBP10.93□□□□□ -0.66
CIITA-202ENST00000381835 ACACBO00763 2458 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 UBE2QL1A1L167 161 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 POM121CA8CG34 1229 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 ARPC5O15511 151 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 MRPL33O75394 65 aaKnown RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 UPK3AO75631 287 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 RP2O75695 350 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 RPP14O95059 124 aaKnown RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 IGHV3-9P01782 118 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 SEC61A1P61619 476 aaKnown RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 HLXQ14774 488 aaPredicted RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 P4HA3Q7Z4N8 544 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 LURAP1LQ8IV03 231 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 LINC00346Q8IVM7 164 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 C20orf196Q8IYI0 205 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 OTOSQ8NHW6 89 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 RGP1Q92546 391 aaPredicted RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 GINS4Q9BRT9 223 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 OR6C65A6NJZ3 312 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 PRR32B1ATL7 298 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 TRIM77I1YAP6 450 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 SOX2P48431 317 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 STAC2Q6ZMT1 411 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 GPR137CQ8N3F9 429 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 OR10H5Q8NGA6 315 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 OR6M1Q8NGM8 313 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 C11orf40Q8WZ69 217 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 ZNF837Q96EG3 531 aaPredicted RBP10.92□□□□□ -0.66
CIITA-202ENST00000381835 BCO1Q9HAY6 547 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 MED9Q9NWA0 146 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 ATPIF1Q9UII2 106 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 TMEM14AQ9Y6G1 99 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 ARHGAP21Q5T5U3 1957 aa10.92□□□□□ -0.66
CIITA-202ENST00000381835 RTTNQ86VV8 2226 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 PYCARD-AS1I3L0S3 204 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 B3GALNT1O75752 331 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 SIX6O95475 246 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 NMBP08949 121 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 TACSTD2P09758 323 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ALOX5APP20292 161 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 GUCA1AP43080 201 aaPredicted RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 EIF2B1Q14232 305 aaKnown RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 ZNF585AQ6P3V2 769 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 FAM122CQ6P4D5 195 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 CORO6Q6QEF8 472 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 TMUB2Q71RG4 321 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 FAM220AQ7Z4H9 259 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 DNAAF1Q8NEP3 725 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 OR5AK2Q8NH90 309 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 RPS4Y2Q8TD47 263 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 SCARB1Q8WTV0 552 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ST8SIA4Q92187 359 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 INTS12Q96CB8 462 aaKnown RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 AMELYQ99218 206 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 CRLF2Q9HC73 371 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ZC4H2Q9NQZ6 224 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ZNF175Q9Y473 711 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ETV7Q9Y603 341 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 OR14I1A6ND48 311 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 KRBOX1C9JBD0 128 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms