RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FBXO7Q9Y3I1 522 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 CCDC187A0A096LP49 1063 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 MT-CO3P00414 261 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 CAPZBP47756 277 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 GPX8Q8TED1 209 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 C11orf40Q8WZ69 217 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TNFSF18Q9UNG2 199 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 LOXL2Q9Y4K0 774 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 COL4A6Q14031 1691 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM218A2RU14 115 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TLCD2A6NGC4 264 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 RNASEK-C17orf49H0YIS7 233 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM127O75204 238 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 LYPD3O95274 346 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 RPL12P30050 165 aaKnown RBP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 FOXL2P58012 376 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 MGAT2Q10469 447 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 RAB32Q13637 225 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 USF2Q15853 346 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ADAM5Q6NVV9 412 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 CATSPERDQ86XM0 798 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ASB13Q8WXK3 278 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 VOPP1Q96AW1 172 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 BORCS8Q96FH0 119 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ARHGAP5-AS1Q96IT6 56 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 PFDN5Q99471 154 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 GPR173Q9NS66 373 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 FAM212BQ9NTI7 297 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 URGCP-MRPS24S4R325 110 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 TRBV5-5A0A0J9YX44 114 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 HSPB2A8KAH6 182 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ELAVL1Q15717 326 aaKnown RBP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 HSPB2Q16082 182 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD9-202ENST00000379826 Q6ZS52 159 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 PRR18Q8N4B5 295 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 ROBO4Q8WZ75 1007 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 RASL12Q9NYN1 266 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 B3GALT5Q9Y2C3 310 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 MMACHCQ9Y4U1 282 aa10.17□□□□□ -0.78
SMAD9-202ENST00000379826 IGHV5-51A0A0C4DH38 117 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SLC16A13Q7RTY0 426 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM217Q8N7C4 229 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SMRP1Q8NCR6 262 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 OR5L2Q8NGL0 311 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 OR13C8Q8NGS7 320 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SLC22A8Q8TCC7 542 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 HIST1H2AAQ96QV6 131 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 MMP26Q9NRE1 261 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 PADI1Q9ULC6 663 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 H0YIG0 161 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 ABCD3P28288 659 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 PDZD11Q5EBL8 140 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 LANCL3Q6ZV70 420 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 OR5T1Q8NG75 326 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SPTSSAQ969W0 71 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 UQCC2Q9BRT2 126 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 CTSFQ9UBX1 484 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 LHX6Q9UPM6 363 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF175Q9Y473 711 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 IGKV1D-42A0A075B6H8 117 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 IGHV3-15A0A0B4J1V0 119 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 HSPA12AO43301 675 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 XRCC2O43543 280 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF354AO60765 605 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 CNOT4O95628 575 aaKnown RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 PNPP00491 289 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SP9P0CG40 484 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF728P0DKX0 622 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 NR2C1P13056 603 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 TMPRSS3P57727 454 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 C17orf67Q0P5P2 114 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 FOXF1Q12946 379 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 LINC01590Q5TEZ4 76 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 TERB2Q8NHR7 220 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 NUBPLQ8TB37 319 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF275Q9NSD4 429 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 KCNS2Q9ULS6 477 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SLC5A6Q9Y289 635 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM184BQ9Y519 407 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 PHF1O43189 567 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 QDPRP09417 244 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 NDUFA6P56556 154 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SYT13Q7L8C5 426 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 SLC36A1Q7Z2H8 476 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 FBXO17Q96EF6 278 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 RSRP1Q9BUV0 290 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-202ENST00000379826 CYB5R1Q9UHQ9 305 aa10.16□□□□□ -0.78
SMAD9-202ENST00000379826 THSD7BQ9C0I4 1608 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 PLPP3O14495 311 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 CD1AP06126 327 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 TMEM128Q5BJH2 165 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms