RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CLRN3Q8NCR9 226 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 OR4D9Q8NGE8 314 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 OR51A2Q8NGJ7 313 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 OR6K3Q8NGY3 331 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 C2CD4CQ8TF44 421 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 IFT22Q9H7X7 185 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 ADGRL4Q9HBW9 690 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 DNAJB12Q9NXW2 375 aaKnown RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 A0A1W2PQF6 199 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 MKRN2OSH3BPM6 223 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 CD80P33681 288 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 AANATQ16613 207 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 PCK2Q16822 640 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 ZBTB37Q5TC79 503 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 GCNT2Q8N0V5 402 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 OR2V1Q8NHB1 315 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF764Q96H86 408 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 UMAD1C9J7I0 102 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 CYTIPO60759 359 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 ARR3P36575 388 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 RAB11AP62491 216 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 SMIM15Q7Z3B0 74 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 TNS1Q9HBL0 1735 aaKnown RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 PTGER4P35408 488 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 CLLU1Q5K131 121 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 LAIR1Q6GTX8 287 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 FJX1Q86VR8 437 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 BAP18Q8IXM2 172 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 JAM3Q9BX67 310 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 TAS2R5Q9NYW4 299 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 CSAG2Q9Y5P2 127 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 URGCP-MRPS24S4R325 110 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 OR6C68A6NDL8 312 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 OR5H14A6NHG9 310 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 C4orf47A7E2U8 309 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 GCM2O75603 506 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-201ENST00000378156 EDDM3BP56851 147 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 H3F3AP84243 136 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 TESK1Q15569 626 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 OR5AS1Q8N127 324 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 OR10G3Q8NGC4 313 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ROBO4Q8WZ75 1007 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 TRIB1Q96RU8 372 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 GDF2Q9UK05 429 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-201ENST00000378156 V9GYH0 126 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 TMEM265A0A087WTH1 108 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF724A8MTY0 619 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ALG1L2C9J202 215 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 SPINT1O43278 529 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ZFPL1O95159 310 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 UBE2IP63279 158 aaKnown RBP13.5□□□□□ -0.25
NPHP4-201ENST00000378156 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 RHBDD2Q6NTF9 364 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 OR51F2Q8NH61 342 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 HPSE2Q8WWQ2 592 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ARPC3O15145 178 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 EML2O95834 649 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 TXNDC12O95881 172 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 METTL15P1P0C7V9 234 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 ADRA2CP18825 462 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 SRSF5Q13243 272 aaKnown RBP13.5□□□□□ -0.25
NPHP4-201ENST00000378156 SIGIRRQ6IA17 410 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 KIRREL1Q96J84 757 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 RTL8AQ9BWD3 113 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 PBOV1Q9GZY1 135 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 UNC13CQ8NB66 2214 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 MYBPHQ13203 477 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 DPPA2Q7Z7J5 298 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 PCOLCE2Q9UKZ9 415 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 R4GN57 208 aa13.5□□□□□ -0.25
NPHP4-201ENST00000378156 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 FIGNL2A6NMB9 653 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 DEGS1O15121 323 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TBPP20226 339 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 ACKR3P25106 362 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 DUSP1P28562 367 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 ANKRD37Q7Z713 158 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TMEM217Q8N7C4 229 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 ZC3HAV1LQ96H79 300 aaKnown RBP13.49□□□□□ -0.25
NPHP4-201ENST00000378156 GNRHR2Q96P88 292 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 MIXL1Q9H2W2 232 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TDRD15B5MCY1 1934 aaKnown RBP13.49□□□□□ -0.25
NPHP4-201ENST00000378156 KIR2DS1A0A191URI9 304 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 SHISA8B8ZZ34 492 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-201ENST00000378156 INHBBP09529 407 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 KIR2DS4P43632 304 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 GUCA2AQ02747 115 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TLE1Q04724 770 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 KIR2DS1Q14954 304 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 OR8B8Q15620 311 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms