RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CHST5Q9GZS9 411 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 RGCCQ9H4X1 137 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 SP140LQ9H930 580 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 PIGLQ9Y2B2 252 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 POLEQ07864 2286 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 DHRS7CA6NNS2 312 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 FAM25AB3EWG3 89 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 FAM25CB3EWG5 89 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 FAM25GB3EWG6 89 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 LDLRAD4O15165 306 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 SULT1B1O43704 296 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 TPRP12270 2363 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 GSK3AP49840 483 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 EFNB2P52799 333 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 LY6DQ14210 128 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 OR8B8Q15620 311 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 UBE2NLQ5JXB2 153 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 STEAP3Q658P3 488 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 TMEM42Q69YG0 159 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 BEND4Q6ZU67 534 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 PGAP1Q75T13 922 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 LYSMD2Q8IV50 215 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 SLC30A7Q8NEW0 376 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 CNTD2Q9H8S5 307 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 ZNF391Q9UJN7 358 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 STARD10Q9Y365 291 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 PCNX1Q96RV3 2341 aa13.57□□□□□ -0.24
NIPAL3-204ENST00000374399 A0A0G2JMP0 313 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 A0A0X1KG70 313 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 MTRF1O75570 445 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 AGFG2O95081 481 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 IGKV3-15P01624 115 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 HTR2CP28335 458 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 UBE2NP61088 152 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 GK2Q14410 553 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 RAB11BQ15907 218 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 C2orf76Q3KRA6 126 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 LIX1LQ8IVB5 337 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 SEMA6DQ8NFY4 1073 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 OR4M2Q8NGB6 313 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 APOBEC3DQ96AK3 386 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 FAM3DQ96BQ1 224 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 C10orf35Q96D05 121 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 SPACA5Q96QH8 159 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 MRI1Q9BV20 369 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 METTL17Q9H7H0 456 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ABCB10Q9NRK6 738 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 CRIM1Q9NZV1 1036 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 SH3BGRL2Q9UJC5 107 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ETV7Q9Y603 341 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 TMEM272A0A1B0GTI8 110 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 A0A1B0GVG6 124 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 XRCC2O43543 280 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ICMTO60725 284 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ALX3O95076 343 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 CSF3P09919 207 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 PRF1P14222 555 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 CBR1P16152 277 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 PTBP1P26599 531 aaKnown RBP eCLIP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 APLNRP35414 380 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 POU3F4P49335 361 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 SCAND1P57086 179 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ZNF181Q2M3W8 571 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 RFPL4BQ6ZWI9 263 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 BHLHA15Q7RTS1 189 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 JAGN1Q8N5M9 183 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ABHD1Q96SE0 405 aa13.56□□□□□ -0.24
NIPAL3-204ENST00000374399 ACACBO00763 2458 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 A8MXE2 369 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 ALDOBP05062 364 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 RIPPLY1Q0D2K3 151 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 IL18Q14116 193 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 HLXQ14774 488 aaPredicted RBP13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 SYNPRQ8TBG9 265 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 UBASH3BQ8TF42 649 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 PP6455Q8WZ26 134 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 AKAP1Q92667 903 aaKnown RBP eCLIP13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
NIPAL3-204ENST00000374399 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 OR5H1A6NKK0 313 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 MSTNO14793 375 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 IGLV1-44P01699 117 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 IL7P13232 177 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 BMP5P22003 454 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 OPRM1P35372 400 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 MAP2K3P46734 347 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms