RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR7C1O76099 320 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 HLA-HP01893 362 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 KIR2DL3P43628 341 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNRF4Q8WWF5 429 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 PLXNB2O15031 1838 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 RPA2P15927 270 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 PNLIPRP2P54317 469 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 MEP1BQ16820 701 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 SHEQ5VZ18 495 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 CAMKMTQ7Z624 323 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 GHRLQ9UBU3 117 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 A0A087WUU8 490 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 AADACP22760 399 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF133P52736 654 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 RBM11P57052 281 aaKnown RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 BAXQ07812 192 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 DUSP8Q13202 625 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 SOWAHCQ53LP3 525 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF385BQ569K4 471 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR52W1Q6IF63 320 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR52A1Q9UKL2 312 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 IGHV1OR21-1A0A087WYE8 117 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 GABRB1P18505 474 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF468Q5VIY5 522 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 TCTN3Q6NUS6 607 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR2L13Q8N349 312 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 ST8SIA1Q92185 356 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR2A14Q96R47 310 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 TEAD3Q99594 435 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 M0R082 166 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 PHF1O43189 567 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 HLA-DOBP13765 273 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 B2MP61769 119 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 GFRALQ6UXV0 394 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 C11orf68Q9H3H3 251 aaKnown RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 CTSFQ9UBX1 484 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 A0A1W2PR64 198 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 DEGS1O15121 323 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 CSF3P09919 207 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 RAB11AP62491 216 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 DGCR2P98153 550 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 CYB5R2Q6BCY4 276 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 PLPP7Q8NBV4 271 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR2I1PQ8NGU4 316 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-201ENST00000372189 MYBPHQ13203 477 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 IKZF1Q13422 519 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 VASH2Q86V25 355 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF683Q8IZ20 524 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 SLC38A6Q8IZM9 456 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 LGI3Q8N145 548 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 PRSS35Q8N3Z0 413 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 MYOTQ9UBF9 498 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 RGS11O94810 467 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 CHRM2P08172 466 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 SELEP16581 610 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 MDH2P40926 338 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 NPY4RP50391 375 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZXDAP98168 799 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ACOT7LQ6ZUV0 252 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 TINAGL1Q9GZM7 467 aaPredicted RBP12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 EGLN1Q9GZT9 426 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ARRDC5A6NEK1 342 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 DRD3P35462 400 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 PSMB3P49720 205 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 SNRPEP62304 92 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 SFTPA1Q8IWL2 248 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 FSCN3Q9NQT6 498 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 H3BVH4 76 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 ACAA1P09110 424 aaPredicted RBP12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 HOXA1P49639 335 aaPredicted RBP12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 EVX1P49640 407 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 C11orf42Q8N5U0 333 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 OPALINQ96PE5 141 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 SLC25A37Q9NYZ2 338 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 CHST2Q9Y4C5 530 aa12.05□□□□□ -0.48
RAPGEF1-201ENST00000372189 PRAMEF4O60810 478 aa12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 SOD1P00441 154 aa12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 PRTGQ2VWP7 1150 aa12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 RBM45Q8IUH3 476 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 C11orf40Q8WZ69 217 aa12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-201ENST00000372189 TRAPPC2LQ9UL33 140 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms