RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GOSR2O14653 212 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 SNAPINO95295 136 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 ITGB2P05107 769 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 SLC25A1P53007 311 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 HSF1Q00613 529 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 MFAP5Q13361 173 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 LRRC37A5PQ49AS3 106 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 AVPI1Q5T686 147 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 GALNTL5Q7Z4T8 443 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 OR1S2Q8NGQ3 325 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 CA5BP1Q8WTZ4 195 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 MRGPRX4Q96LA9 322 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 CHST11Q9NPF2 352 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 ASF1BQ9NVP2 202 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 TMEM14AQ9Y6G1 99 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 RELNP78509 3460 aa9.44□□□□□ -0.9
TPM3-212ENST00000368533 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 PPT1P50897 306 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 LUMP51884 338 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 ADAM8P78325 824 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 BLOC1S1P78537 153 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 PMP22Q01453 160 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 C11orf88Q6PI97 169 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 PLPP7Q8NBV4 271 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 ROBO4Q8WZ75 1007 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 MIB2Q96AX9 1013 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 GPN1Q9HCN4 374 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 ZNF230Q9UIE0 474 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 OR4C45A6NMZ5 311 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 CTDSPLO15194 276 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 CREBL2O60519 120 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 MT-ATP6P00846 226 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 IGHV3-9P01782 118 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 IGHV2-70P01814 119 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 IGHEP01854 428 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 GIPP09681 153 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 GTF2F2P13984 249 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 ALOX5APP20292 161 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 RAP2BP61225 183 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 OR1C1Q15619 314 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 H3F3CQ6NXT2 135 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 CDC20BQ86Y33 519 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 EIF4E3Q8N5X7 224 aaKnown RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 DVL3Q92997 716 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 SGK3Q96BR1 496 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 GPX7Q96SL4 187 aaPredicted RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 PFDN5Q99471 154 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 ATG5Q9H1Y0 275 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 TXNIPQ9H3M7 391 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 OPN4Q9UHM6 478 aa9.43□□□□□ -0.9
TPM3-212ENST00000368533 TPRP12270 2363 aaKnown RBP9.43□□□□□ -0.9
TPM3-212ENST00000368533 NAP1L6A6NFF2 107 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 TMEM212A6NML5 194 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 TM4SF5O14894 197 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 CALCBP10092 127 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 EFNB2P52799 333 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 RSPO4Q2I0M5 234 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 WDR38Q5JTN6 314 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 ZNF627Q7L945 461 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 FADS6Q8N9I5 356 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 ZNF845Q96IR2 970 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 B3GAT1Q9P2W7 334 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 PCDHB10Q9UN67 800 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 B9D1Q9UPM9 204 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 A0A0J9YW62 118 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 UBE2QL1A1L167 161 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 OR6C65A6NJZ3 312 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 NEURL1O76050 574 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 FAUP35544 74 aaKnown RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 MNDAP41218 407 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 MAGEA5P43359 124 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 POU3F4P49335 361 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 CLDN17P56750 224 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 HABP2Q14520 560 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 ZNF684Q5T5D7 378 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 GLDNQ6ZMI3 551 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 TMEM17Q86X19 198 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 GPR87Q9BY21 358 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 SRXN1Q9BYN0 137 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 BARX1Q9HBU1 254 aaPredicted RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 LRRC3CA6NJW4 275 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 C21orf140B9A014 251 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 PRAF2O60831 178 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 CD1AP06126 327 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 VSIG10L2P0DP72 767 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 APEHP13798 732 aaKnown RBP9.42□□□□□ -0.9
TPM3-212ENST00000368533 CNR1P21554 472 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 MSX1P28360 303 aa9.42□□□□□ -0.9
TPM3-212ENST00000368533 BDKRB2P30411 391 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms