RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LCATP04180 440 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
VAMP4-202ENST00000367740 CAV3P56539 151 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 TAS2R41P59536 307 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 CSNK2BP67870 215 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 ZNF92Q03936 586 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 KCNMB1Q16558 191 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 MEP1BQ16820 701 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 PAGE3Q5JUK9 113 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 MAVSQ7Z434 540 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 C11orf65Q8NCR3 313 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 BPIFA2Q96DR5 249 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 Q96M85 177 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 CITED4Q96RK1 184 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 ZNF649Q9BS31 505 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 DNTTIP1Q9H147 329 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 RERGLQ9H628 205 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 C14orf119Q9NWQ9 140 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 VSX1Q9NZR4 365 aaPredicted RBP11.71□□□□□ -0.53
VAMP4-202ENST00000367740 RIMS3Q9UJD0 308 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 CORO2BQ9UQ03 480 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-202ENST00000367740 AHCYL1O43865 530 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 SLC16A7O60669 478 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 OR5F1O95221 314 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 IFI30P13284 250 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 NDUFB7P17568 137 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 TNFRSF1BP20333 461 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 COX7A1P24310 79 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 CRYBA2P53672 197 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 LGALS4P56470 323 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 STX3Q13277 289 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 PIN1Q13526 163 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-202ENST00000367740 CFAP77Q6ZQR2 320 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-202ENST00000367740 OR51D1Q8NGF3 324 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 OR2AE1Q8NHA4 323 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 LYZL4Q96KX0 146 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 SYT4Q9H2B2 425 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 ABCB10Q9NRK6 738 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 SNTG1Q9NSN8 517 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
VAMP4-202ENST00000367740 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 EVPLLA8MZ36 301 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 BHLHE40O14503 412 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 XKRYO14609 159 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 UBDO15205 165 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 KHDRBS3O75525 346 aaKnown RBP11.69□□□□□ -0.54
VAMP4-202ENST00000367740 GLCEO94923 617 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 POU1F1P28069 291 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 SDHAP31040 664 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 GRK5P34947 590 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 GGT2P36268 569 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 LUMP51884 338 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-202ENST00000367740 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 TRAP1Q12931 704 aaKnown RBP11.69□□□□□ -0.54
VAMP4-202ENST00000367740 SNAI3Q3KNW1 292 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 ZNF570Q96NI8 536 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 OR52B2Q96RD2 323 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 MYLK2Q9H1R3 596 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 WDR13Q9H1Z4 485 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 HAO2Q9NYQ3 351 aa11.69□□□□□ -0.54
VAMP4-202ENST00000367740 SIGLEC5O15389 551 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 KITP10721 976 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 GMFBP60983 142 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 KCTD18Q6PI47 426 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 DPY19L4Q7Z388 723 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 FUNDC1Q8IVP5 155 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 LNX2Q8N448 690 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 OR1M1Q8NGA1 313 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 OR56B2PQ8NGI1 322 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 OR13C2Q8NGS9 318 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 OR5K1Q8NHB7 308 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 ANGPTL6Q8NI99 470 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 RBMXL1Q96E39 390 aaKnown RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 MED30Q96HR3 178 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 RAB3IPQ96QF0 476 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 ATF6BQ99941 703 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 POLR2J2Q9GZM3 115 aaKnown RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 POLR2J3Q9H1A7 115 aaKnown RBP11.68□□□□□ -0.54
VAMP4-202ENST00000367740 HEXA-AS1Q9H8Q6 139 aa11.68□□□□□ -0.54
VAMP4-202ENST00000367740 CD14P08571 375 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 JUNBP17275 347 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-202ENST00000367740 SLC9A3P48764 834 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 MXRA7P84157 204 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 KRR1Q13601 381 aaKnown RBP11.67□□□□□ -0.54
VAMP4-202ENST00000367740 CYP51A1Q16850 503 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 GLYATL3Q5SZD4 288 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 OAFQ86UD1 273 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms