RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
PRKN-204ENST00000366896 SELENOIQ9C0D9 397 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 G6PC2Q9NQR9 355 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 CYTL1Q9NRR1 136 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 SEMA5BQ9P283 1151 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 TRBV6-7A0A0A0MS04 114 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 LOC101059948A0A1B0GTJ6 334 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 DCDC2BA2VCK2 349 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 SGCEO43556 437 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 GDF9O60383 454 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 AHSA1O95433 338 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 S100A8P05109 93 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 CSN2P05814 226 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 PSMB6P28072 239 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 EIF1AXP47813 144 aaKnown RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 SPOCK1Q08629 439 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 ECH1Q13011 328 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 AIMP2Q13155 320 aaKnown RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 NKPD1Q17RQ9 610 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 FAHD2BQ6P2I3 314 aaPredicted RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 DRAM2Q6UX65 266 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 ZNF574Q6ZN55 896 aaPredicted RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 WDFY1Q8IWB7 410 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 ELP5Q8TE02 316 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 TMED6Q8WW62 240 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 AQP3Q92482 292 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 FAHD2AQ96GK7 314 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 ZNF251Q9BRH9 671 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 CHMP1AQ9HD42 196 aaPredicted RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 COA3Q9Y2R0 106 aaPredicted RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 EMC9Q9Y3B6 208 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 WDR87Q6ZQQ6 2873 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 SCGNO76038 276 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 DNASE1L1P49184 302 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 RAB5BP61020 215 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 SNRPEP62304 92 aaKnown RBP13.06□□□□□ -0.32
PRKN-204ENST00000366896 PEA15Q15121 130 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 GFOD2Q3B7J2 385 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 CORO6Q6QEF8 472 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 CD163Q86VB7 1156 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 ZNF584Q8IVC4 421 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 SLC26A10Q8NG04 563 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 OR4S1Q8NGB4 309 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 OR1N1Q8NGS0 311 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 GSN-AS1Q9NRJ2 163 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 RAB22AQ9UL26 194 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
PRKN-204ENST00000366896 EEF1E1-BLOC1S5C9J1V9 151 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 ABCD3P28288 659 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 MMP16P51512 607 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 FOXL2P58012 376 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 FMODQ06828 376 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 SLC29A4Q7RTT9 530 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 ST7LQ8TDW4 575 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 DCUN1D4Q92564 292 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 COPS7AQ9UBW8 275 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 FREM3P0C091 2139 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 LOC107986453A0A1B0GWG9 222 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 METTL21EPA6NDL7 271 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 PAX6P26367 422 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 GSK3AP49840 483 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 RNASE10Q5GAN6 216 aaKnown RBP13.05□□□□□ -0.32
PRKN-204ENST00000366896 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 JAGN1Q8N5M9 183 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 OR13C3Q8NGS6 347 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 TMEM234Q8WY98 164 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 FBLN5Q9UBX5 448 aa13.05□□□□□ -0.32
PRKN-204ENST00000366896 A0A0B4J2A0 478 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 ADAM10O14672 748 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 HSD11B1P28845 292 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 ZNF260Q3ZCT1 412 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 RNF126Q9BV68 326 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 EGLN1Q9GZT9 426 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 LPAR3Q9UBY5 353 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 SHPKQ9UHJ6 478 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 FAM96BQ9Y3D0 163 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 EP300Q09472 2414 aaPredicted RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 FARS2O95363 451 aaKnown RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 ZNF823P16415 610 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 TBPP20226 339 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 DAP3P51398 398 aaKnown RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 NSDHLQ15738 373 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 CDNFQ49AH0 187 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms