RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OBP2BQ9NPH6 170 aa12.02□□□□□ -0.49
PDLIM5-203ENST00000359265 COMMD3Q9UBI1 195 aa12.02□□□□□ -0.49
PDLIM5-203ENST00000359265 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.49
PDLIM5-203ENST00000359265 V9GYS6 101 aa12.02□□□□□ -0.49
PDLIM5-203ENST00000359265 NAV3Q8IVL0 2385 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 LOC390937A0A1W2PQ73 354 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 C5orf49A4QMS7 147 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 IFITM5A6NNB3 132 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 DHRS7CA6NNS2 312 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 MSTNO14793 375 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 SERPINA5P05154 406 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ADRA2CP18825 462 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ATF1P18846 271 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ANOS1P23352 680 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 IL32P24001 234 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 TNFSF8P32971 234 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 THBS4P35443 961 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 DDOSTP39656 456 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ETV6P41212 452 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF45Q02386 682 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 DCTN2Q13561 401 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 TBC1D28Q2M2D7 210 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 GLT8D1Q68CQ7 371 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ASPHD2Q6ICH7 369 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 Q6ZSR3 168 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 PGAP1Q75T13 922 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 MRGPRGQ86SM5 289 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 CCDC190Q86UF4 302 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 LAX1Q8IWV1 398 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 OR5D14Q8NGL3 314 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF671Q8TAW3 534 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 TRMT10AQ8TBZ6 339 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 RND1Q92730 232 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 C10orf35Q96D05 121 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ADAT3Q96EY9 351 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 POM121L2Q96KW2 1035 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 GFI1Q99684 422 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 C1QTNF5Q9BXJ0 243 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 OSGIN2Q9Y236 505 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 MEMO1Q9Y316 297 aa12.01□□□□□ -0.49
PDLIM5-203ENST00000359265 A0A0G2JNJ9 132 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 HPGDSO60760 199 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
PDLIM5-203ENST00000359265 CBR1P16152 277 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 RAB3AP20336 220 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 CCNOP22674 350 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 CFPP27918 469 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 BDKRB2P30411 391 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 MRPL49Q13405 166 aaKnown RBP12□□□□□ -0.49
PDLIM5-203ENST00000359265 TSC22D1Q15714 1073 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 GLYATL3Q5SZD4 288 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 HES5Q5TA89 166 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 COLCA1Q6ZS62 124 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF584Q8IVC4 421 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 DNAAF1Q8NEP3 725 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 SLC30A7Q8NEW0 376 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 OR1M1Q8NGA1 313 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 OR2AE1Q8NHA4 323 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 SGK3Q96BR1 496 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF75AQ96N20 296 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 DMRTA2Q96SC8 542 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 SOX7Q9BT81 388 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 MOV10Q9HCE1 1003 aaKnown RBP12□□□□□ -0.49
PDLIM5-203ENST00000359265 Q9UFV3 132 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
PDLIM5-203ENST00000359265 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
PDLIM5-203ENST00000359265 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM25AB3EWG3 89 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM25CB3EWG5 89 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM25GB3EWG6 89 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 EEF1E1-BLOC1S5C9J1V9 151 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 J3QW42 95 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 EEF1E1O43324 174 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 SULT1B1O43704 296 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 CALCBP10092 127 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF14P17017 642 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 PSMB1P20618 241 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 CD40LGP29965 261 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 MAP2K3P46734 347 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 SPOCK1Q08629 439 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 MALLQ13021 153 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 LRRC28Q86X40 367 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 SAMD12Q8N8I0 201 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 OR13C9Q8NGT0 318 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 LGALS14Q8TCE9 139 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 PP6455Q8WZ26 134 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms