RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 BIN3Q9NQY0 253 aa10.15□□□□□ -0.78
FN1-204ENST00000356005 SPAARA0A1B0GVQ0 90 aa10.15□□□□□ -0.78
FN1-204ENST00000356005 PCSK6P29122 969 aa10.15□□□□□ -0.78
FN1-204ENST00000356005 CCL17Q92583 94 aa10.15□□□□□ -0.78
FN1-204ENST00000356005 TAS2R4Q9NYW5 299 aa10.15□□□□□ -0.78
FN1-204ENST00000356005 PTPRDP23468 1912 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 MBP02144 154 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 LIPCP11150 499 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 EMDP50402 254 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 UBAC2Q8NBM4 344 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 DPCDQ9BVM2 203 aaPredicted RBP10.15□□□□□ -0.79
FN1-204ENST00000356005 OCEL1Q9H607 264 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 MMP25Q9NPA2 562 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 RCE1Q9Y256 329 aa10.15□□□□□ -0.79
FN1-204ENST00000356005 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 NKX6-1P78426 367 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 MOB1BQ7L9L4 216 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 SOX7Q9BT81 388 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 DVL1O14640 695 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 RPS2P15880 293 aaKnown RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 C17orf107Q6ZR85 190 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 SKA3Q8IX90 412 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 FYTTD1Q96QD9 318 aaKnown RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 PFDN5Q99471 154 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ABCA1O95477 2261 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 WDR1O75083 606 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 PELI3Q8N2H9 469 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 GRAMD2BQ96HH9 432 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ST3GAL6Q9Y274 331 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ATXN7O15265 892 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 SSX2Q16385 188 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 FAM26EQ8N5C1 309 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 SMIM19Q96E16 107 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 NMES1Q9C002 83 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 TRAF3IP2O43734 574 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 DHODHQ02127 395 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 PRICKLE4Q2TBC4 344 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 EXOSC3Q9NQT5 275 aaKnown RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 NDUFB11Q9NX14 153 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ADRA2CP18825 462 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 OMGP23515 440 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
FN1-204ENST00000356005 SLC17A1Q14916 467 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 CXXC4Q9H2H0 198 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 TRAPPC4Q9Y296 219 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 FRMPD3Q5JV73 1810 aa10.14□□□□□ -0.79
FN1-204ENST00000356005 ELP2Q6IA86 826 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 OR8G2PQ6IF36 304 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 BANF2Q9H503 90 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SLA2Q9H6Q3 261 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 MED29Q9NX70 200 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 H3BMQ9 156 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 RAB27BO00194 218 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 NKX2-2O95096 273 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SNRPBP14678 240 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 UBE2IP63279 158 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 ZNF574Q6ZN55 896 aaPredicted RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 DBX2Q6ZNG2 339 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 BSCL2Q96G97 398 aaPredicted RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 RIF1Q5UIP0 2472 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 LRRC3CA6NJW4 275 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 OR5B21A6NL26 309 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 C16orf97H3BN30 126 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SLC25A26Q70HW3 274 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PHC2Q8IXK0 858 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SYS1Q8N2H4 156 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SAP30LQ9HAJ7 183 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PSMB1P20618 241 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 OR2I1PQ8NGU4 316 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 MED30Q96HR3 178 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 LRP3O75074 770 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SP9P0CG40 484 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 UBE2G1P62253 170 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PNLIPRP3Q17RR3 467 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PPIL3Q9H2H8 161 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 POFUT1Q9H488 388 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 GALNT9Q9HCQ5 603 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PHF3Q92576 2039 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 A6NIN4 97 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 ZNF17P17021 662 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 RAB6AP20340 208 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 PAX6P26367 422 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 GDNFP39905 211 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 KIR2DL1P43626 348 aaPredicted RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 SSBP1Q04837 148 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 TMEM215Q68D42 235 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 DLEU7Q6UYE1 221 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 ZCCHC14Q8WYQ9 949 aaKnown RBP10.13□□□□□ -0.79
FN1-204ENST00000356005 ZSWIM8A7E2V4 1837 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SHC1P29353 583 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 FZD5Q13467 585 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SPNS3Q6ZMD2 512 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 NIPSNAP1Q9BPW8 284 aa10.13□□□□□ -0.79
FN1-204ENST00000356005 SLC25A19Q9HC21 320 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms