RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TRIB1Q96RU8 372 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 NUDT16L1Q9BRJ7 211 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SELENOIQ9C0D9 397 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SPAG17Q6Q759 2223 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 RNF212BA8MTL3 300 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 TK1P04183 234 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 CLDN12P56749 244 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 RPL23AP62750 156 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DCAF10Q5QP82 559 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 NDRG3Q9UGV2 375 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DBHP09172 617 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ASAH2BP0C7U1 165 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 SULF2Q8IWU5 870 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 OR10D3Q8NH80 312 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 IGLV3-12A0A075B6K2 115 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ANKRD61A6NGH8 418 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 TBX6O95947 436 aaPredicted RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 GABRB1P18505 474 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 TNK1Q13470 666 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 HMGN3Q15651 99 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 SUMF2Q8NBJ7 301 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ZFC3H1O60293 1989 aaKnown RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 GOSR2O14653 212 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 CTXN2P0C2S0 81 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 CSRP2Q16527 193 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 PLPPR5Q32ZL2 321 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 MESTQ5EB52 335 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 SIAH3Q8IW03 269 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 TMEM82A0PJX8 343 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 TUBAL3A6NHL2 446 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 PDGFBP01127 241 aaPredicted RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 TCRBP04435 133 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 GSTP1P09211 210 aaKnown RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF44P15621 663 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF121P58317 390 aaPredicted RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 OPCMLQ14982 345 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 NKPD1Q17RQ9 610 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 PNLIPRP3Q17RR3 467 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF573Q86YE8 665 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 REEP6Q96HR9 211 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 MYEF2Q9P2K5 600 aaKnown RBP10.86□□□□□ -0.67
SMAD9-201ENST00000350148 SLC22A13Q9Y226 551 aa10.86□□□□□ -0.67
SMAD9-201ENST00000350148 BTBD17A6NE02 478 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 NPIPB13A6NJU9 1138 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 NPIPB4C9JG80 1138 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 TPT1P13693 172 aaKnown RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 ATF1P18846 271 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 PAX6P26367 422 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 RAD52P43351 418 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 TAS2R20P59543 309 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF85Q03923 595 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 C14orf79Q96F83 325 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 AICDAQ9GZX7 198 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF816-ZNF321PA0A0X1KG74 233 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 FABP7O15540 132 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF354AO60765 605 aaPredicted RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 TOX4O94842 621 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 BCL2A1Q16548 175 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 CYSLTR2Q9NS75 346 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 EHFQ9NZC4 300 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 SFTPBP07988 381 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 SNU13P55769 128 aaKnown RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 RPS18P62269 152 aaKnown RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 TOR2AQ5JU69 321 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 OR10K1Q8NGX5 313 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF596Q8TC21 504 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 PTP4A1Q93096 173 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 NICN1Q9BSH3 213 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 DCAF16Q9NXF7 216 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 MTCL1Q9Y4B5 1905 aaKnown RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 LIPCP11150 499 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 MMP15P51511 669 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 FUT6P51993 359 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 EXOSC6Q5RKV6 272 aaKnown RBP10.85□□□□□ -0.67
SMAD9-201ENST00000350148 HPSE2Q8WWQ2 592 aa10.85□□□□□ -0.67
SMAD9-201ENST00000350148 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 NRASP01111 189 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 OR8U9P0C7N5 309 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 GABRA1P14867 456 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 NUFIP2Q7Z417 695 aaKnown RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF845Q96IR2 970 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 GUCD1Q96NT3 240 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 KIR2DS1A0A191URI9 304 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 NUDT19A8MXV4 375 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 KLK10O43240 276 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 CST2P09228 141 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 PPP3CBP16298 524 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 DCTDP32321 178 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 KIR2DS4P43632 304 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms