RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.4
NIPAL3-202ENST00000339255 ABCA4P78363 2273 aa12.52□□□□□ -0.41
NIPAL3-202ENST00000339255 ROS1P08922 2347 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 H3BSH0 61 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 CASKO14936 926 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SELEP16581 610 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SDC2P34741 201 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 THBS4P35443 961 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SERPINB10P48595 397 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PPP3R1P63098 170 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SNTB2Q13425 540 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 BEX5Q5H9J7 111 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 FGGYQ96C11 551 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 TECTBQ96PL2 329 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PPIL3Q9H2H8 161 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 OR51B6Q9H340 312 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 KLF2Q9Y5W3 355 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 GGT3PA6NGU5 568 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ATP6V1G2-DDX39BF2Z307 99 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ABCD4O14678 606 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PDCD5O14737 125 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PIN1P1O15428 100 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ERCC1P07992 297 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 GLRXP35754 106 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 GNALP38405 381 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 PSMD7P51665 324 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 NKX6-1P78426 367 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 HLXQ14774 488 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SPCS2Q15005 226 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF718Q3SXZ3 478 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 UTS2BQ765I0 119 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 LINC01560Q8TB33 94 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 SLC25A40Q8TBP6 338 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 OR2J1Q9GZK6 312 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 CHST5Q9GZS9 411 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 RNF167Q9H6Y7 350 aa12.51□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF816-ZNF321PA0A0X1KG74 233 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 A0A1W2PPK0 400 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 ALX3O95076 343 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 FAHP16930 419 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 ACKR3P25106 362 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 MAGEB1P43366 347 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 KIR2DL3P43628 341 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 MBNL2Q5VZF2 373 aaKnown RBP12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 RGS7BPQ6MZT1 257 aaPredicted RBP12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 SLC22A25Q6T423 547 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 KRT74Q7RTS7 529 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 CROCCP3Q8IVE0 287 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 OR56B2PQ8NGI1 322 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 KLF14Q8TD94 323 aaPredicted RBP12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 PIGTQ969N2 578 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 HAVCR1Q96D42 359 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 SOX7Q9BT81 388 aa12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 CCDC59Q9P031 241 aaKnown RBP12.5□□□□□ -0.41
NIPAL3-202ENST00000339255 A0A1W2PPW3 197 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 CD300LBA8K4G0 201 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 SULT1B1O43704 296 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 LMX1BO60663 402 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 TMEM127O75204 238 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 CDRT1O95170 752 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 CD3EP07766 207 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 IGFBP2P18065 325 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 RAB3AP20336 220 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 GCH1P30793 250 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 SOX6P35712 828 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 TGFBR1P36897 503 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 TNK1Q13470 666 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 SPATA46Q5T0L3 261 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF529Q6P280 563 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 DYNC2LI1Q8TCX1 351 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 PLPPR2Q96GM1 343 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 POFUT1Q9H488 388 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 ZCCHC4Q9H5U6 513 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF442Q9H7R0 627 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 ABCB9Q9NP78 766 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 TAS2R4Q9NYW5 299 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
NIPAL3-202ENST00000339255 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ANXA2P2A6NMY6 339 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CST4P01036 141 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF250P15622 560 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 RAB3BP20337 219 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 SELENOVP59797 346 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms