RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 HPP00738 406 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 ITGB2P05107 769 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 SRD5A2P31213 254 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 ZNF774Q6NX45 483 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 SEZ6L2Q6UXD5 910 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 NKAIN3Q8N8D7 197 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 PIGTQ969N2 578 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 GPER1Q99527 375 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 SLC6A7Q99884 636 aa20.29■□□□□ 0.84
CLPTM1-201ENST00000337392 SVILO95425 2214 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 LOC102725191A0A1B0GVB3 256 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 TRIM77I1YAP6 450 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 TMEM127O75204 238 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 CD37P11049 281 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 ITGA3P26006 1051 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 H2BFSP57053 126 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 FOXO1Q12778 655 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 TRAPPC6BQ86SZ2 158 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 POFUT1Q9H488 388 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 PLATP00750 562 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 SERPINA7P05543 415 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 PLA2G2CQ5R387 149 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 SLC36A1Q7Z2H8 476 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 MRPS28Q9Y2Q9 187 aaKnown RBP20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 GVINP1Q7Z2Y8 2422 aa20.28■□□□□ 0.84
CLPTM1-201ENST00000337392 CREBL2O60519 120 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 NEURL1O76050 574 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 POU3F2P20265 443 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 AVPR2P30518 371 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 SPEM2Q0P670 501 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 ZNF260Q3ZCT1 412 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 C4orf46Q504U0 113 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 ZNF626Q68DY1 528 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 CRIP3Q6Q6R5 217 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 C1orf147Q96MC9 270 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 NAA11Q9BSU3 229 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 CACNA1GO43497 2377 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 ZNF716A6NP11 495 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 RAC3P60763 192 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 UBE2V2Q15819 145 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 FTMTQ8N4E7 242 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 OR14K1Q8NGZ2 314 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 MAFIPQ8WZ33 124 aa20.27■□□□□ 0.84
CLPTM1-201ENST00000337392 CYB5AP00167 134 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 PLAC9Q5JTB6 97 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 C10orf128Q5T292 105 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 HES3Q5TGS1 186 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF529Q6P280 563 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 HDDC2Q7Z4H3 204 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 DPCDQ9BVM2 203 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 SLC17A5Q9NRA2 495 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 KCNK7Q9Y2U2 307 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF736B4DX44 427 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 H3BUI4 141 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 M0R135 149 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 MT-CO3P00414 261 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 FAUP35544 74 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 KCNMB1Q16558 191 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 ARMC10Q8N2F6 343 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 GJC3Q8NFK1 279 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 C15orf40Q8WUR7 153 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF799Q96GE5 643 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 EDEM2Q9BV94 578 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF581Q9P0T4 197 aa20.26■□□□□ 0.83
CLPTM1-201ENST00000337392 TNFSF15O95150 251 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 PRKACAP17612 351 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 LIN54Q6MZP7 749 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 BPIFB2Q8N4F0 458 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 GON7Q9BXV9 100 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 GOSR2O14653 212 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 SHOXO15266 292 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 CRTAPO75718 401 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 MPC2O95563 127 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 ICAM2P13598 275 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 MAGEA5P43359 124 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 FOXG1P55316 489 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 TSPAN5P62079 268 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 C20orf196Q8IYI0 205 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 BATF2Q8N1L9 274 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 AQP3Q92482 292 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 LPAR5Q9H1C0 372 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 SLC6A15Q9H2J7 730 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 RAB22AQ9UL26 194 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 PIGLQ9Y2B2 252 aa20.25■□□□□ 0.83
CLPTM1-201ENST00000337392 SSX5O60225 188 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 NOS1APO75052 506 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 RAD51DO75771 328 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF735P0CB33 412 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 SPINK2P20155 84 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 ACKR3P25106 362 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 SRSF6Q13247 344 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 H3F3CQ6NXT2 135 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 MRGPRFQ96AM1 343 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 RANBP3Q9H6Z4 567 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 HEXA-AS1Q9H8Q6 139 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 ZNF230Q9UIE0 474 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 STMND1H3BQB6 276 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 SCO1O75880 301 aa20.24■□□□□ 0.83
CLPTM1-201ENST00000337392 VAMP5O95183 116 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms