RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NUDCD2Q8WVJ2 157 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 OIT3Q8WWZ8 545 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ARHGDIGQ99819 225 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 RAXQ9Y2V3 346 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 CSAG2Q9Y5P2 127 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ATG2AQ2TAZ0 1938 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SIGLEC5O15389 551 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ZFPL1O95159 310 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 IGHG1P01857 330 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SCGB1C1Q8TD33 95 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SORCS2Q96PQ0 1159 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ULBP2Q9BZM5 246 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ENKD1Q9H0I2 346 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 KLHL13Q9P2N7 655 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 MOKQ9UQ07 419 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SNRPGP15A8MWD9 76 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 VSTM5A8MXK1 200 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 LINC01387J3KSC0 135 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 CALCBP10092 127 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 NKX6-1P78426 367 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-201ENST00000334136 PLA2G7Q13093 441 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 TMEM91Q6ZNR0 172 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 ADGRG3Q86Y34 549 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SYS1Q8N2H4 156 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 ADIPOR1Q96A54 375 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 WFDC6Q9BQY6 131 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 TRGV8A0A0C4DH27 118 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 PLPP2O43688 288 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 VAMP5O95183 116 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SFTPCP11686 197 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 CD53P19397 219 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 ALDH3B1P43353 468 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 IAH1Q2TAA2 248 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-201ENST00000334136 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SLC16A9Q7RTY1 509 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 MUC20Q8N307 709 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SUMF2Q8NBJ7 301 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 OR4S1Q8NGB4 309 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 MIB2Q96AX9 1013 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 RAB3CQ96E17 227 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 IMMP1LQ96LU5 166 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 TAS2R4Q9NYW5 299 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 HDGFL3Q9Y3E1 203 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
HDAC6-201ENST00000334136 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 IDH3GP51553 393 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-201ENST00000334136 DEFA6Q01524 100 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 PMPCAQ10713 525 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 RSU1Q15404 277 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 FHL5Q5TD97 284 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 C19orf48Q6RUI8 117 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 COMTD1Q86VU5 262 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 FDCSPQ8NFU4 85 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 OR4D6Q8NGJ1 314 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 SLC19A3Q9BZV2 496 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 BANF2Q9H503 90 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 NTMQ9P121 344 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 PLXNB3Q9ULL4 1909 aa10.53□□□□□ -0.72
HDAC6-201ENST00000334136 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 CFDP00746 253 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-201ENST00000334136 IL2RAP01589 272 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 IGKV1D-16P01601 117 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 LPLP06858 475 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 FCGR2AP12318 317 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 BIDP55957 195 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 HNF4GQ14541 408 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 OR5M9Q8NGP3 310 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 FAM213BQ8TBF2 198 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 TRIB1Q96RU8 372 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-201ENST00000334136 SIGLEC7Q9Y286 467 aa10.52□□□□□ -0.72
HDAC6-201ENST00000334136 TSPAN2O60636 221 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 SLC34A2O95436 690 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 IFNA2P01563 188 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 SERPINF1P36955 418 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 C9orf135Q5VTT2 229 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 OR2M7Q8NG81 312 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 TRANK1O15050 2925 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 OR2F2O95006 317 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 IFNA5P01569 189 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 ARF1P84077 181 aaKnown RBP10.52□□□□□ -0.73
HDAC6-201ENST00000334136 OR2F1Q13607 317 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 CISD2Q8N5K1 135 aaKnown RBP10.52□□□□□ -0.73
HDAC6-201ENST00000334136 OR1J2Q8NGS2 313 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 OR2V1Q8NHB1 315 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 ZC3HAV1LQ96H79 300 aaKnown RBP10.52□□□□□ -0.73
HDAC6-201ENST00000334136 SLC25A32Q9H2D1 315 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 CHST11Q9NPF2 352 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms