RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 P2RY10O00398 339 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 UBE2CO00762 179 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 EFNA2O43921 213 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 MELTFP08582 738 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 RAB5BP61020 215 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 EGR3Q06889 387 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 SMCO1Q147U7 214 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 GLYATL3Q5SZD4 288 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 INO80EQ8NBZ0 244 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 INTS12Q96CB8 462 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 C14orf79Q96F83 325 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC25A44Q96H78 314 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 VSTM2BA6NLU5 285 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 GNALP38405 381 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF41P51814 821 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 PRKXP51817 358 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 RASGEF1BQ0VAM2 473 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 FABP9Q0Z7S8 132 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 COMMD2Q86X83 199 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 FAM46BQ96A09 425 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 FAM3DQ96BQ1 224 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF775Q96BV0 537 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 DEFB126Q9BYW3 111 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 CST11Q9H112 138 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 TRBV5-7A0A0A0MS05 114 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 F2RL1P55085 397 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 HSF1Q00613 529 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 ASPHD2Q6ICH7 369 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 SKA3Q8IX90 412 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 BPIFB2Q8N4F0 458 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 NFAM1Q8NET5 270 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 OR13C3Q8NGS6 347 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 EDAQ92838 391 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 MRGPRFQ96AM1 343 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 SPACA5Q96QH8 159 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 CMKLR1Q99788 373 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 WDR77Q9BQA1 342 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 RSRP1Q9BUV0 290 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 CYTL1Q9NRR1 136 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 UPB1Q9UBR1 384 aa13.8□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM269A0A1B0GVZ9 245 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF208O43345 1280 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 CCL4P13236 92 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 TAS2R19P59542 299 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 MYBPHQ13203 477 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 KCTD18Q6PI47 426 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 H1FNTQ75WM6 255 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 KCTD9Q7L273 389 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 CPEB2Q7Z5Q1 589 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM200AQ86VY9 491 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 CASTOR1Q8WTX7 329 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 PCDHGA1Q9Y5H4 931 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 ADAM10O14672 748 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 RAMP1O60894 148 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM127O75204 238 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 S100A8P05109 93 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 ZBTB25P24278 435 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 DNASE1L1P49184 302 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 BAP18Q8IXM2 172 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 BHLHE23Q8NDY6 225 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC39A7Q92504 469 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC25A21Q9BQT8 299 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 POTEKPQ9BYX7 375 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 RNF122Q9H9V4 155 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 MMP26Q9NRE1 261 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 MYOTQ9UBF9 498 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 FTCDNL1E5RQL4 147 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 F8VVB4 439 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 F8VWA3 439 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 PJVKQ0ZLH3 352 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 MFAP5Q13361 173 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 TOMM20Q15388 145 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 MOGAT2Q3SYC2 334 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 HIST1H2BAQ96A08 127 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 EDEM2Q9BV94 578 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 RHOFQ9HBH0 211 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 CSAG2Q9Y5P2 127 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 U3KQA8 63 aa13.79□□□□□ -0.2
SHROOM1-201ENST00000319854 LOC400499M0QZD8 3231 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 AGPAT2O15120 278 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 ADH6P28332 368 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 KMT5CQ86Y97 462 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 RNF141Q8WVD5 230 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 MR1Q95460 341 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 A0A1W2PPC1 479 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF814B7Z6K7 855 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 S100A6P06703 90 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 FOLR2P14207 255 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 HGFACQ04756 655 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 RAB11BQ15907 218 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM176BQ3YBM2 270 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM225Q6GV28 225 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 746.1 ms