RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TRIM15Q9C019 465 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 FAM107BQ9H098 131 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 EGLN3Q9H6Z9 239 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 ZMAT4Q9H898 229 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 UNKLQ9H9P5 680 aaKnown RBP6.78□□□□□ -1.32
TPM3-203ENST00000312970 FN3KRPQ9HA64 309 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 IL20Q9NYY1 176 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 ERVK-18Q9QC07 812 aa6.78□□□□□ -1.32
TPM3-203ENST00000312970 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
TPM3-203ENST00000312970 TRAV38-1A0A0B4J264 116 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TRAV40A0A0B4J280 105 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TVP23AA6NH52 213 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 LGALS8O00214 317 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TNFRSF11BO00300 401 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 ZNF593O00488 134 aaPredicted RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 BHLHE40O14503 412 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TNFRSF13BO14836 293 aaPredicted RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 ARPC2O15144 300 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 ATP8B1O43520 1251 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 ENSAO43768 121 aaKnown RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 PTBP3O95758 552 aaKnown RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 GASTP01350 101 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 CLEC2LP0C7M8 214 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 FMO3P31513 532 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 OTX1P32242 354 aaPredicted RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 FGF12P61328 243 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 ZNF92Q03936 586 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 MZT1Q08AG7 82 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TAF13Q15543 124 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 OR8B8Q15620 311 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 DEFB112Q30KQ8 113 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 SNAI3Q3KNW1 292 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 GPR157Q5UAW9 335 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 PRAMEF6Q5VXH4 476 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 SFRP4Q6FHJ7 346 aaPredicted RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 RASSF6Q6ZTQ3 369 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 BOLLQ8N9W6 283 aaKnown RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 CYB561A3Q8NBI2 242 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 C19orf18Q8NEA5 215 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 OR4C15Q8NGM1 316 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 ZNRF4Q8WWF5 429 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TMIGD2Q96BF3 282 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TECTBQ96PL2 329 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 PCGF1Q9BSM1 259 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 SLITRK2Q9H156 845 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 MMADHCQ9H3L0 296 aaPredicted RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 NOX4Q9NPH5 578 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 TRIM36Q9NQ86 728 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 CENPMQ9NSP4 180 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 NDE1Q9NXR1 346 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 MRPL15Q9P015 296 aaKnown RBP6.77□□□□□ -1.33
TPM3-203ENST00000312970 KIF17Q9P2E2 1029 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 LYVE1Q9Y5Y7 322 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 CDH10Q9Y6N8 788 aa6.77□□□□□ -1.33
TPM3-203ENST00000312970 A0A0G2JK05 382 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 A6NLC8 198 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 ADARB2-AS1A8MUL3 147 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 SRRM5B3KS81 715 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 ZNF879B4DU55 563 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 C22orf46C9J442 243 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 P2RY10O00398 339 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 ADAM20O43506 726 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 XRCC2O43543 280 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 TOX4O94842 621 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 CCNB2O95067 398 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 CRYBA1P05813 215 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 GRPP07492 148 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 DDOSTP39656 456 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 RPS27P42677 84 aaKnown RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 SLC15A1P46059 708 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 ENTPD1P49961 510 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 PRKXP51817 358 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 MNAT1P51948 309 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 BLVRAP53004 296 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 MXRA7P84157 204 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 PCK2Q16822 640 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 TEX30Q5JUR7 227 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 GLYATL3Q5SZD4 288 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 C16orf89Q6UX73 402 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 BRD3OSQ6XYD6 125 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 Q6YL49 198 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 DEFB107AQ8IZN7 70 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 LNX2Q8N448 690 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 PNLDC1Q8NA58 520 aaKnown RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 SLC37A3Q8NCC5 494 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 OR51L1Q8NGJ5 315 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 OR2AE1Q8NHA4 323 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 SLAMF6Q96DU3 332 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 FAM71F1Q96KD3 344 aaPredicted RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 CHCHD6Q9BRQ6 235 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 BTBD10Q9BSF8 475 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 COPS4Q9BT78 406 aa6.76□□□□□ -1.33
TPM3-203ENST00000312970 ADAT1Q9BUB4 502 aaKnown RBP6.76□□□□□ -1.33
TPM3-203ENST00000312970 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms