RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ADAT3Q96EY9 351 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 BSCL2Q96G97 398 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 GNRHR2Q96P88 292 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 SPACA5Q96QH8 159 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ADAM19Q9H013 955 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 BPNT1O95861 308 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 BGLAPP02818 100 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 GAPDHP04406 335 aaKnown RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 GLRA1P23415 457 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 RABIFP47224 123 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 PPP1CAP62136 330 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 SGCGQ13326 291 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ERV3-1Q14264 604 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FAM78AQ5JUQ0 283 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 AADACL3Q5VUY0 350 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FIP1L1Q6UN15 594 aaKnown RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MED25Q71SY5 747 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 LINC00346Q8IVM7 164 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 OR1E3Q8WZA6 343 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 RSC1A1Q92681 617 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 RTN4RQ9BZR6 473 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 OPA3Q9H6K4 179 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ANAPC10Q9UM13 185 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 CLDN16Q9Y5I7 305 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MED19A0JLT2 244 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 CXorf65A6NEN9 183 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 K7EPK0 472 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MASP2O00187 686 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 SLC31A1O15431 190 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 IFNA17P01571 189 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ISG15P05161 165 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MAS1LP35410 378 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 GNALP38405 381 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 EMP2P54851 167 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 UCP2P55851 309 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 TOMM34Q15785 309 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 PCK2Q16822 640 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ACTBL2Q562R1 376 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FAM71E2Q8N5Q1 922 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FOXQ1Q9C009 403 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 TWSG1Q9GZX9 223 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 UFSP2Q9NUQ7 469 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FBXO7Q9Y3I1 522 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MMP24Q9Y5R2 645 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 COL6A3P12111 3177 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 TMEM269A0A1B0GVZ9 245 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 TMEM14DPA8MWL7 114 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 SOCS1O15524 211 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 HSD11B1P28845 292 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 ACTR1BP42025 376 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 RPL27P61353 136 aaKnown RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 BTG2P78543 158 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 BIKQ13323 160 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 PSRC1Q6PGN9 363 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 BAHD1Q8TBE0 780 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 SLC25A36Q96CQ1 311 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 CNTNAP3Q9BZ76 1288 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 OR10A5Q9H207 317 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 S1PR5Q9H228 398 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 DOK5Q9P104 306 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 THAP10Q9P2Z0 257 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 COA3Q9Y2R0 106 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 MRPS23Q9Y3D9 190 aaKnown RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 PTPRSQ13332 1948 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 A0A1W2PP11 408 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 C2orf74A8MZ97 194 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 SDCBPO00560 298 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 JTBO76095 146 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 OR13C7P0DN81 318 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 FAM3AP98173 230 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 TDGQ13569 410 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 DCXRQ7Z4W1 244 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 LHFPL1Q86WI0 220 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 SLC22A24Q8N4F4 322 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 PATE1Q8WXA2 126 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 SCARF2Q96GP6 870 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 MEGF10Q96KG7 1140 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 PIGQQ9BRB3 760 aa9.65□□□□□ -0.86
ZNF558-201ENST00000301475 VSX1Q9NZR4 365 aaPredicted RBP9.65□□□□□ -0.86
ZNF558-201ENST00000301475 A0A1B0GV50 99 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 OR2C1O95371 312 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 HPGDP15428 266 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 PTGER4P35408 488 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 NDUFA6P56556 154 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF124Q15973 351 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 SPNS3Q6ZMD2 512 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 Q7L0L9 218 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 SSX9Q7RTT3 188 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 SFTPA2Q8IWL1 248 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 ST7LQ8TDW4 575 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 MR1Q95460 341 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 ELSPBP1Q96BH3 223 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms