RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CST11Q9H112 138 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 VSX1Q9NZR4 365 aaPredicted RBP16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 HHLA2Q9UM44 414 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 EP300Q09472 2414 aaPredicted RBP16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 IGLV1-36A0A0B4J1U3 117 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 IGKV1D-43A0A0B4J1Z2 117 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 DCDC2BA2VCK2 349 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF98A6NK75 572 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 IL13RA1P78552 427 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 SCRN3Q0VDG4 424 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 CDNFQ49AH0 187 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 C10orf91Q5T1B1 145 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 CORO6Q6QEF8 472 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 H1FNTQ75WM6 255 aaPredicted RBP16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 MDGA2Q7Z553 956 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 JAGN1Q8N5M9 183 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 OR4K17Q8NGC6 315 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 MFSD8Q8NHS3 518 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 CT55Q8WUE5 264 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 ZMAT3Q9HA38 289 aaKnown RBP16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 TCFL5Q9UL49 500 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 LRP12Q9Y561 859 aa16.21■□□□□ 0.18
PDLIM3-201ENST00000284767 PCSK5Q92824 1860 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 METTL21EPA6NDL7 271 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 LIPT2A6NK58 231 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 F8VVB4 439 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 F8VWA3 439 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 CSN2P05814 226 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 CYC1P08574 325 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 Q0VFX4 171 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 EIF2B1Q14232 305 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 EXT1Q16394 746 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 NKPD1Q17RQ9 610 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 HYAL4Q2M3T9 481 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 PPP1R32Q7Z5V6 425 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 CD163Q86VB7 1156 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 LDLRAD3Q86YD5 345 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 OR4S1Q8NGB4 309 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 OR5AP2Q8NGF4 316 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 OR51A2Q8NGJ7 313 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 OR13C3Q8NGS6 347 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 FOXRED1Q96CU9 486 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 JSRP1Q96MG2 331 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 ABHD6Q9BV23 337 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 SDHAF3Q9NRP4 125 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 FOXJ2Q9P0K8 574 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 MBD2Q9UBB5 411 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 COA3Q9Y2R0 106 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 FAM25EA8MYX2 175 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF814B7Z6K7 855 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 C9orf172C9J069 976 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 JMJD7P0C870 316 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 LIPCP11150 499 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 RPS19BP1Q86WX3 136 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 SPAG16Q8N0X2 631 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 GTPBP8Q8N3Z3 284 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 PIK3IP1Q96FE7 263 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 MRGPRX4Q96LA9 322 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 PROK2Q9HC23 129 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 CARHSP1Q9Y2V2 147 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 R4GMQ9 66 aa16.2■□□□□ 0.18
PDLIM3-201ENST00000284767 IGLV3-32A0A0A0MS00 114 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ETV2O00321 342 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF208O43345 1280 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ISG15P05161 165 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TPT1P13693 172 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 MSX1P28360 303 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF260Q3ZCT1 412 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 C6orf15Q6UXA7 325 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 FJX1Q86VR8 437 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TMEM156Q8N614 296 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 BOLLQ8N9W6 283 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 OR52N5Q8NH56 324 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ARL11Q969Q4 196 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 MRGPRFQ96AM1 343 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 OR5B2Q96R09 309 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 CHST11Q9NPF2 352 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TMEM100Q9NV29 134 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF629Q9UEG4 869 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 GDF2Q9UK05 429 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 RAB22AQ9UL26 194 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TP53I11O14683 189 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 RAMP1O60894 148 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 SRSF10O75494 262 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ADCYAP1P18509 176 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 NAAAQ02083 359 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 SPOCK1Q08629 439 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 MICBQ29980 383 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 DHRS7BQ6IAN0 325 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 PGAP1Q75T13 922 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TRAPPC6BQ86SZ2 158 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 LYPD6Q86Y78 171 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 ZNF248Q8NDW4 579 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 M1APQ8TC57 530 aa16.19■□□□□ 0.18
PDLIM3-201ENST00000284767 TEX13DA0A0J9YY54 714 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-201ENST00000284767 NPIPA5E9PKD4 350 aa16.18■□□□□ 0.18
PDLIM3-201ENST00000284767 DUS4LO95620 317 aaKnown RBP16.18■□□□□ 0.18
PDLIM3-201ENST00000284767 F10P00742 488 aa16.18■□□□□ 0.18
PDLIM3-201ENST00000284767 CD79AP11912 226 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms