RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 ACTG1P63261 375 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 MRPS10P82664 201 aaKnown RBP5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 OR1C1Q15619 314 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 SLC25A53Q5H9E4 307 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 HDDC2Q7Z4H3 204 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 ARMC10Q8N2F6 343 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 C9orf62Q8N4C0 152 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 ZIC4Q8N9L1 334 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 CLEC1AQ8NC01 280 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 DEFB124Q8NES8 71 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 UTP23Q9BRU9 249 aaKnown RBP5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 LDAHQ9H6V9 325 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 RHBDD3Q9Y3P4 386 aa5.32□□□□□ -1.56
TNFSF4-201ENST00000281834 DMXL2Q8TDJ6 3036 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 IGLV3-32A0A0A0MS00 114 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TMEM82A0PJX8 343 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 LRRC3CA6NJW4 275 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 HSPB2A8KAH6 182 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 RAB27BO00194 218 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PMS2P2O95744 297 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 IGFBP3P17936 291 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CASRP41180 1078 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TAS2R19P59542 299 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ENDOGQ14249 297 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 HSPB2Q16082 182 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 DCAF12L2Q5VW00 463 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 DEGS2Q6QHC5 323 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GLDNQ6ZMI3 551 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PAQR4Q8N4S7 273 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ZBTB44Q8NCP5 570 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 FGFBP3Q8TAT2 258 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PSMF1Q92530 271 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 RAB3CQ96E17 227 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ARHGAP5-AS1Q96IT6 56 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CLEC4MQ9H2X3 399 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 FAM86C1Q9NVL1 165 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CPAMD8Q8IZJ3 1885 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 A0A087WZY1 265 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 C13orf42A0A1B0GVH6 325 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 A0A1W2PR80 420 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 NAP1L6A6NFF2 107 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 B4E171 279 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 KCNAB3O43448 404 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 MRPL33O75394 65 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 HLA-HP01893 362 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GP1BAP07359 652 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GLI4P10075 376 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 BLVRBP30043 206 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SRD5A2P31213 254 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TSPAN7P41732 249 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 NPY4RP50391 375 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 MTCP1P56278 107 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 RAC3P60763 192 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 H3F3AP84243 136 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SORDQ00796 357 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PMP22Q01453 160 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 KISS1Q15726 138 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GRK1Q15835 563 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PCK2Q16822 640 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 DCAF10Q5QP82 559 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 NKAIN3Q8N8D7 197 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PNLDC1Q8NA58 520 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 OR6S1Q8NH40 331 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 OR2V1Q8NHB1 315 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GPX8Q8TED1 209 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 C15orf40Q8WUR7 153 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PNPLA2Q96AD5 504 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 RANBP3Q9H6Z4 567 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TAS2R8Q9NYW2 309 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SCP2D1Q9UJQ7 156 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 KCNK7Q9Y2U2 307 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 NOSIPQ9Y314 301 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 FLVCR1Q9Y5Y0 555 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 IGKV1-9A0A0C4DH69 117 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 A0A1B0GUH1 482 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 GJE1A6NN92 205 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 EEF1E1-BLOC1S5C9J1V9 151 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 C3orf80F5H4A9 247 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 L7N2F9 121 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 VAMP5O95183 116 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ISG15P05161 165 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SULT1A3P0DMM9 295 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SULT1A4P0DMN0 295 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CD79AP11912 226 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ZNF17P17021 662 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CSRP1P21291 193 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 H2BFSP57053 126 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 UBE2V2Q15819 145 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TAF9Q16594 264 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 LGALSLQ3ZCW2 172 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ELFN2Q5R3F8 820 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TSPO2Q5TGU0 170 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CDH24Q86UP0 819 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 FOXRED2Q8IWF2 684 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SULF2Q8IWU5 870 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TUSC5Q8IXB3 177 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 OR5AS1Q8N127 324 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms