RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 OR13G1Q8NGZ3 307 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 OR8U1Q8NH10 309 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 MACROD1Q9BQ69 325 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 GAL3ST2Q9H3Q3 398 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CACFD1Q9UGQ2 172 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 MOKQ9UQ07 419 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 ACP2P11117 423 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 THBS3P49746 956 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ACSM1Q08AH1 577 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 GPR50Q13585 617 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ZNF273Q14593 569 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 LTC4SQ16873 150 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 OR52W1Q6IF63 320 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 PWWP2BQ6NUJ5 590 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 RNF113BQ8IZP6 322 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 D2HGDHQ8N465 521 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 HSD17B11Q8NBQ5 300 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TMEM163Q8TC26 289 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 EID2BQ96D98 161 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ATP5SQ99766 215 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SFXN3Q9BWM7 321 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 JAM3Q9BX67 310 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 WWTR1Q9GZV5 400 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 LPAR3Q9UBY5 353 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 DAPP1Q9UN19 280 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 MED16Q9Y2X0 877 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ARL2-SNX15V9GYD0 113 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 LRRC37A2A6NM11 1700 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 K7EQM0 130 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 TUSC2O75896 110 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 MPIG6BO95866 241 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CPEP16870 476 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 MTNR1BP49286 362 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 PAFAH1B2P68402 229 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CCDC144NLQ6NUI1 221 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TMEM81Q6P7N7 255 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TOMM20LQ6UXN7 152 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TSLPQ969D9 159 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 MRPS24Q96EL2 167 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 SLC35A4Q96G79 324 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 C19orf43Q9BQ61 176 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CABLES2Q9BTV7 478 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 INPP5EQ9NRR6 644 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 HHLA2Q9UM44 414 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TRIP11Q15643 1979 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 NPIPA5A0A0B4J1W7 369 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 DEGS1O15121 323 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 PPM1DO15297 605 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 FOXH1O75593 365 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 PPP1R3DO95685 299 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SDHAP31040 664 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CLDN20P56880 219 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 INPP5JQ15735 1006 aaPredicted RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 NKG7Q16617 165 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 OR2G6Q5TZ20 316 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 HEPHL1Q6MZM0 1159 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SLC48A1Q6P1K1 146 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 NRMQ8IXM6 262 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SAP25Q8TEE9 199 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TMED6Q8WW62 240 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 IL1F10Q8WWZ1 152 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SAMD8Q96LT4 415 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 GPR78Q96P69 363 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 C1orf123Q9NWV4 160 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 ZDBF2Q9HCK1 2354 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ZNF785A8K8V0 405 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 IGHV3-9P01782 118 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GABRB1P18505 474 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 PFN3P60673 137 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GGTA1PQ4G0N0 100 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GGNBP1Q5YKI7 109 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 SAXO2Q658L1 398 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 NT5CQ8TCD5 201 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 DYNC2LI1Q8TCX1 351 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 CCL17Q92583 94 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GMPPAQ96IJ6 420 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 TMEM208Q9BTX3 173 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 RGS13O14921 159 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 SEMA7AO75326 666 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 TK1P04183 234 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 NTF3P20783 257 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 BLVRBP30043 206 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 TPPP2P59282 170 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GNB1P62873 340 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 TMEM183BQ1AE95 376 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ACOT7LQ6ZUV0 252 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 VRK3Q8IV63 474 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 LRRC56Q8IYG6 542 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 SLC24A4Q8NFF2 622 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 C4orf36Q96KX1 117 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 EXOSC3Q9NQT5 275 aaKnown RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 DLL4Q9NR61 685 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 FBXO34Q9NWN3 711 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 CTSFQ9UBX1 484 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 GOLT1BQ9Y3E0 138 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms