RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MRI1Q9BV20 369 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 ESRP2Q9H6T0 727 aaKnown RBP11.16□□□□□ -0.62
LSM8-201ENST00000249299 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 ABCB9Q9NP78 766 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 NPAP1Q9NZP6 1156 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 CCDC59Q9P031 241 aaKnown RBP11.16□□□□□ -0.62
LSM8-201ENST00000249299 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
LSM8-201ENST00000249299 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
LSM8-201ENST00000249299 TUBAL3A6NHL2 446 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 M0R1B8 84 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 CASKO14936 926 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ZG16O60844 167 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 GOSR1O95249 250 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 PRB1P04280 392 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ALDOBP05062 364 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 THBDP07204 575 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 CCL2P13500 99 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ZNF20P17024 532 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 SDC2P34741 201 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 GLRXP35754 106 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 SERPINB10P48595 397 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 GSK3AP49840 483 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 RORCP51449 518 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ZNF83P51522 516 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 PPP1CBP62140 327 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 LSM3P62310 102 aaKnown RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 PPP3R1P63098 170 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 INSL4Q14641 139 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 DGUOKQ16854 277 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ODF4Q2M2E3 257 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 ZNF101Q8IZC7 436 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 PAQR4Q8N4S7 273 aaPredicted RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 OR13C5Q8NGS8 318 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 PIGTQ969N2 578 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 FOXRED1Q96CU9 486 aaPredicted RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 HAVCR1Q96D42 359 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 CHST5Q9GZS9 411 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 PPIL3Q9H2H8 161 aaKnown RBP11.15□□□□□ -0.62
LSM8-201ENST00000249299 N6AMT1Q9Y5N5 214 aa11.15□□□□□ -0.62
LSM8-201ENST00000249299 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 NKX2-6A6NCS4 301 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 CDRT1O95170 752 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 CST4P01036 141 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 NGFP01138 241 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 RAB3AP20336 220 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 RAB3BP20337 219 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 GNALP38405 381 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 SOX2P48431 317 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 CAPZA1P52907 286 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 NKX6-1P78426 367 aaPredicted RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 ZNF718Q3SXZ3 478 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 BEX5Q5H9J7 111 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 RFPL4BQ6ZWI9 263 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 MYPOPQ86VE0 399 aaPredicted RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 NDNFQ8TB73 568 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 AP3S1Q92572 193 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 SPSB1Q96BD6 273 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 FGGYQ96C11 551 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 CPNE2Q96FN4 548 aaPredicted RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 FAM71F1Q96KD3 344 aaPredicted RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 SLC22A4Q9H015 551 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 NOP16Q9Y3C1 178 aaKnown RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
LSM8-201ENST00000249299 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 HIVEP3Q5T1R4 2406 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
LSM8-201ENST00000249299 ZNF816-ZNF321PA0A0X1KG74 233 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 POM121CA8CG34 1229 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 NOTOA8MTQ0 251 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 SULT1B1O43704 296 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 AVPP01185 164 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 ZNF182P17025 639 aaPredicted RBP11.13□□□□□ -0.63
LSM8-201ENST00000249299 KITLGP21583 273 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 SCAND1P57086 179 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 MOGQ16653 247 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 GFOD2Q3B7J2 385 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 CLVS2Q5SYC1 327 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 DNAAF1Q8NEP3 725 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 OR1J1Q8NGS3 322 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
LSM8-201ENST00000249299 MARS2Q96GW9 593 aaKnown RBP11.13□□□□□ -0.63
LSM8-201ENST00000249299 UQCC2Q9BRT2 126 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 RNF167Q9H6Y7 350 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 ZNF442Q9H7R0 627 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 MRPL15Q9P015 296 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms