RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 HERV-K104P61576 105 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 SPIN3Q5JUX0 258 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 C9orf135Q5VTT2 229 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 MAML2Q8IZL2 1156 aaPredicted RBP13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 DTWD2Q8NBA8 298 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 ZSCAN1Q8NBB4 408 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 LINC00052Q96N35 136 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 TMPRSS13Q9BYE2 586 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 NPTNQ9Y639 398 aa13.27□□□□□ -0.29
UBE2D4-201ENST00000222402 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 BCL2L14Q9BZR8 327 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 HEXA-AS1Q9H8Q6 139 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 C9orf170A2RU37 121 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 FTCDNL1E5RQL4 147 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 H3BUI4 141 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 DHHO43323 396 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 PRSS12P56730 875 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 SNTB1Q13884 538 aaKnown RBP13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 AAED1Q7RTV5 226 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC36A1Q7Z2H8 476 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 ZBTB44Q8NCP5 570 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 CYB5R1Q9UHQ9 305 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 VSIG4Q9Y279 399 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 A0A1W2PP11 408 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 RAB27BO00194 218 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 AGPAT2O15120 278 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 GSTP1P09211 210 aaKnown RBP13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 GDF1P27539 372 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 TRIM61Q5EBN2 209 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF75AQ96N20 296 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 SMIM3Q9BZL3 60 aa13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
UBE2D4-201ENST00000222402 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 TNFSF11O14788 317 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 IGHV3-9P01782 118 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 CELA2AP08217 269 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 EXT1Q16394 746 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 PIGCQ92535 297 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 CMSS1Q9BQ75 279 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 OR2M5A3KFT3 312 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 F8W036 122 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 TOX3O15405 576 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 RAD51DO75771 328 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 ITGB2P05107 769 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 RPA2P15927 270 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 KISS1Q15726 138 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 C17orf82Q86X59 251 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 OR2M3Q8NG83 312 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 OR6X1Q8NH79 312 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 FNDC9Q8TBE3 224 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 ARL11Q969Q4 196 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 HIST1H2AAQ96QV6 131 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 PIGQQ9BRB3 760 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 MLXQ9UH92 298 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 PCP4L1A6NKN8 68 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 SGCEO43556 437 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 VAMP5O95183 116 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 NMBP08949 121 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 GLI4P10075 376 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 TBPP20226 339 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 CARD18P57730 90 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 DMWDQ09019 674 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 C1orf100Q5SVJ3 147 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC38A6Q8IZM9 456 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 ZDHHC22Q8N966 263 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 STOML3Q8TAV4 291 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 METTL9Q9H1A3 318 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 AKIRIN1Q9H9L7 192 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 PRR13Q9NZ81 148 aa13.25□□□□□ -0.29
UBE2D4-201ENST00000222402 A0A1B0GTQ1 180 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 FBXO24O75426 580 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 ISG15P05161 165 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 M6PRP20645 277 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 FKBP2P26885 142 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 TAF9Q16594 264 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC25A24Q6NUK1 477 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC16A14Q7RTX9 510 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 KCNK7Q9Y2U2 307 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 CDC14BO60729 498 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 PLGLB1Q02325 96 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 PDSS1Q5T2R2 415 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 OR6S1Q8NH40 331 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 FBXO9Q9UK97 447 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 B3GALT1Q9Y5Z6 326 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 ANGPTL7O43827 346 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 IGHMP01871 453 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 OPRM1P35372 400 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 CASRP41180 1078 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms