RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 H2afb3S4R1G7 115 aa10.42□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Dpp4P28843 760 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Sox1P53783 391 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 RptnP97347 1118 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Lgals3bpQ07797 577 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tgoln1Q62313 353 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Hist2h2abQ64522 130 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr479Q7TRV1 327 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Acot4Q8BWN8 421 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm13199Q8C8E0 125 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 SdhaQ8K2B3 664 aaKnown RBP10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 FntbQ8K2I1 437 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Slc25a28Q8R0Z5 364 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr836Q8VFJ3 317 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1238Q8VG59 315 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr134Q8VG95 312 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Atg5Q99J83 275 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Sgo1Q9CXH7 517 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 ShpkQ9D5J6 476 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tspan4Q9DCK3 238 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Znf346Q9R0B7 294 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Kcne4Q9WTW3 170 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 FaimQ9WUD8 179 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1018A2ASV3 311 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Scgb1b30A2BH64 92 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Rhox3gB9EJQ9 160 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm6465F7A7Y6 181 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn2r51L7N215 852 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm3033M0QWI0 180 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm3532M0QWL4 194 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Best1O88870 551 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 MosP00536 390 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Sod2P09671 222 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 P18524 117 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 ActbP60710 375 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Actg1P63260 375 aaKnown RBP10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ube2iP63280 158 aaKnown RBP10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Elavl1P70372 326 aaKnown RBP10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Q80UB0 333 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Fam212bQ80VY2 300 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 NrrosQ8BMT4 693 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Defb21Q8C5Z4 100 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Asf1bQ9DAP7 202 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 9530002B09RikQ9EPV7 135 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 RhcgQ9QXP0 498 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Cml5Q9QXS8 227 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tnfsf14Q9QYH9 239 aa10.41□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Exph5Q0VAV2 1960 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Igkv9-124A0A0G2JDR3 117 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 A0A286YDP4 300 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 HbzP06467 142 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Il2rgP34902 369 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Npas1P97459 594 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Doxl2Q6IMK7 723 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gpatch2Q7TQC7 527 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Zar1Q80SU3 361 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Nhlrc2Q8BZW8 725 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 GnalQ8CGK7 381 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Krtcap3Q8K177 240 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Rnf113a1Q8R3P8 341 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr510Q8VEW6 314 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ackr4Q924I3 350 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Nudcd2Q9CQ48 157 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tmem216Q9CQC4 141 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gfod2Q9CYH5 385 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr888Q9EQA5 314 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Apc2Q9Z1K7 2274 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm20489A2AGH5 449 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 4930522L14RikE9QAG4 666 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ccl22O88430 92 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Selenbp1P17563 472 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 BidP70444 195 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tnfrsf26P83626 204 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Csrp1P97315 193 aaKnown RBP10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Znf511Q6P0X2 227 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Kng2Q6S9I3 644 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Plekhm1Q7TSI1 1074 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Abhd13Q80UX8 337 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Rtp2Q80ZI2 223 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Q8BR90 294 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Slc35f4Q8BZK4 485 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 CmblQ8R1G2 245 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr862Q8VFJ1 306 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Serpinb1bQ8VHP7 382 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Zfp61Q923D1 555 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Cryba2Q9JJV1 197 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 GnmtQ9QXF8 293 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ak3Q9WTP7 227 aa10.4□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ndufaf5A2APY7 343 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Akirin2B1AXD8 201 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Mptx2D3YYJ7 219 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr568E9Q554 313 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr618K7N6B3 318 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ly6aP05533 134 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 S100a13P97352 98 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 SlbpP97440 275 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 MestQ07646 335 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Bbs12Q5SUD9 708 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr205Q7TS37 305 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 ArsjQ8BM89 598 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms