RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 KIR3DL2P43630 455 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 MMP15P51511 669 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 BIDP55957 195 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 RPS11P62280 158 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLN6-217ENST00000636964 TRIP6Q15654 476 aaKnown RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 SLC25A53Q5H9E4 307 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 RAET1LQ5VY80 246 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 LRRN1Q6UXK5 716 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 RBMS3Q6XE24 437 aaKnown RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 OR1M1Q8NGA1 313 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 OR1J4Q8NGS1 313 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 PAQR8Q8TEZ7 354 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ANGPTL4Q9BY76 406 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 POTEKPQ9BYX7 375 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 BARX1Q9HBU1 254 aaPredicted RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 DOCK10Q96BY6 2186 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ETV2O00321 342 aaPredicted RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 SC5DO75845 299 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 IGHEP01854 428 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ADAM8P78325 824 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 DEFA5Q01523 94 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 FGL1Q08830 312 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 CARD17Q5XLA6 110 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 TMUB2Q71RG4 321 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 FAM220AQ7Z4H9 259 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ZNF671Q8TAW3 534 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ASB10Q8WXI3 467 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 CDC6Q99741 560 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ADAT1Q9BUB4 502 aaKnown RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 UPK3AO75631 287 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 RAB3BP20337 219 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 OC90Q02509 493 aaPredicted RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 RBMS2Q15434 407 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 TMEM225Q6GV28 225 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 FAAP20Q6NZ36 180 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 ALKBH4Q9NXW9 302 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 B3GAT1Q9P2W7 334 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 CUL9Q8IWT3 2517 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 DMXL1Q9Y485 3027 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 LOC101059948A0A1B0GTJ6 334 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 ARPC5O15511 151 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 RAD1O60671 282 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 CNOT4O95628 575 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 WNT11O96014 354 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 GALP22466 123 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 S100A11P31949 105 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 ODF1Q14990 250 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 PXKQ7Z7A4 578 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 C12orf45Q8N5I9 185 aaPredicted RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 BPIFCQ8NFQ6 507 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 OR5M9Q8NGP3 310 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 WNT2BQ93097 391 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 PPP1R14AQ96A00 147 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 C14orf144Q96I85 54 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 THOC3Q96J01 351 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 IL17BQ9UHF5 180 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 ZNF318Q5VUA4 2279 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 IGHV3-15A0A0B4J1V0 119 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 SULT2B1O00204 365 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 OR2A4O95047 310 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 TACSTD2P09758 323 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 SLC2A1P11166 492 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 LIFP15018 202 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 MAPK3P27361 379 aaPredicted RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 SOX2P48431 317 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 DLX5P56178 289 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 H2BFSP57053 126 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 ZP4Q12836 540 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 TRAM1Q15629 374 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 BEST3Q8N1M1 668 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 DEFB124Q8NES8 71 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 OR52B4Q8NGK2 314 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 OTOSQ8NHW6 89 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 RGP1Q92546 391 aaPredicted RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 OR2A7Q96R45 310 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 SLC25A18Q9H1K4 315 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 ELOVL3Q9HB03 270 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 NOX4Q9NPH5 578 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 KLHL13Q9P2N7 655 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 DKKL1Q9UK85 242 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 B3GALT5Q9Y2C3 310 aa10.22□□□□□ -0.77
CLN6-217ENST00000636964 AK6Q9Y3D8 172 aaKnown RBP10.22□□□□□ -0.77
CLN6-217ENST00000636964 ZIC3O60481 467 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 DOK2O60496 412 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 ABHD16AO95870 558 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 IGHMP01871 453 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 RAB40ALP0C0E4 278 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 OR4E1P0C645 316 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 ATF1P18846 271 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.77
CLN6-217ENST00000636964 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.77
CLN6-217ENST00000636964 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 LINC00346Q8IVM7 164 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms