RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 BAIAP2Q9UQB8 552 aa9.34□□□□□ -0.91
TARDBP-221ENST00000619555 LRCH1Q9Y2L9 728 aa9.34□□□□□ -0.91
TARDBP-221ENST00000619555 FAM183AA6NL82 134 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 IQCF6A8MYZ5 107 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 TMPRSS2O15393 492 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 HLA-DPB1P04440 258 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 GYPBP06028 91 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 CRABP1P29762 137 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 GRK5P34947 590 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 GINS1Q14691 196 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 SLC9A3R2Q15599 337 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 KRTAP27-1Q3LI81 207 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 ZFP1Q6P2D0 407 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 COLCA1Q6ZS62 124 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 NAA40Q86UY6 237 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 ZDHHC13Q8IUH4 622 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 SLC26A10Q8NG04 563 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 OR51L1Q8NGJ5 315 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 CIB1Q99828 191 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 HDHD2Q9H0R4 259 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 MED20Q9H944 212 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 ZNF556Q9HAH1 456 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 SLC25A19Q9HC21 320 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 CMC2Q9NRP2 79 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 TMEM100Q9NV29 134 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 KIF17Q9P2E2 1029 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 MIOXQ9UGB7 285 aa9.33□□□□□ -0.92
TARDBP-221ENST00000619555 IGHV2-70DA0A0C4DH43 119 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 F5H5K5 113 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 M0R129 80 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 KCNAB3O43448 404 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 RNASE1P07998 156 aaKnown RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 ACSM4P0C7M7 580 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 POLR2IP36954 125 aaKnown RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 RPS27P42677 84 aaKnown RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 CRISP1P54107 249 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 GNB2P62879 340 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 HOXA4Q00056 320 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 PTGES3Q15185 160 aaKnown RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 ZNF404Q494X3 552 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 LINC01590Q5TEZ4 76 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 DNM1P34Q6PK57 102 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 SHISA2Q6UWI4 295 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 LYPD2Q6UXB3 125 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 BTNL3Q6UXE8 466 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 LRRN1Q6UXK5 716 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 CFAP77Q6ZQR2 320 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 PARP8Q8N3A8 854 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 C19orf18Q8NEA5 215 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 RAB40AQ8WXH6 277 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 DACT3Q96B18 629 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 UPRTQ96BW1 309 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 NEIL1Q96FI4 390 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 PITX2Q99697 317 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 OSBPL10Q9BXB5 764 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 UNKLQ9H9P5 680 aaKnown RBP9.32□□□□□ -0.92
TARDBP-221ENST00000619555 KRT84Q9NSB2 600 aa9.32□□□□□ -0.92
TARDBP-221ENST00000619555 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 MDFIC2A0A1B0GVS7 189 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 A0A1B0GWJ7 208 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 TVP23AA6NH52 213 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 LRRC30A6NM36 301 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PLATP00750 562 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 LCATP04180 440 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 SPI1P17947 270 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 CPT2P23786 658 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 GGT2P36268 569 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PITPNBP48739 271 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 SLC25A1P53007 311 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 MAB21L1Q13394 359 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 GK2Q14410 553 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-221ENST00000619555 ZNF181Q2M3W8 571 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PRR31Q5SQ13 230 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PRAMEF6Q5VXH4 476 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 BBS1Q8NFJ9 593 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 OR8B3Q8NGG8 313 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PLEKHA8Q96JA3 519 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 OR8B2Q96RD0 313 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 ZMAT3Q9HA38 289 aaKnown RBP9.31□□□□□ -0.92
TARDBP-221ENST00000619555 PNRC2Q9NPJ4 139 aaKnown RBP9.31□□□□□ -0.92
TARDBP-221ENST00000619555 CYB5R1Q9UHQ9 305 aa9.31□□□□□ -0.92
TARDBP-221ENST00000619555 NOTCH1P46531 2555 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 TRAV40A0A0B4J280 105 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 ERICH4A6NGS2 130 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 RIIAD1A6NNX1 92 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 ZAR1LA6NP61 321 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 CLDN34H7C241 214 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 EI24O14681 340 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 PRKYO43930 277 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 FAM20BO75063 409 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 IFNGP01579 166 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 HLA-DQA2P01906 255 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 ALPLP05186 524 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
TARDBP-221ENST00000619555 IRF2P14316 349 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms