RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SYNGR3O43761 229 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 ARSBP15848 533 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 ABOP16442 354 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 IGFBP3P17936 291 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 TAS2R20P59543 309 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 PCBD1P61457 104 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 PSG4Q00888 419 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 SARAFQ96BY9 339 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR2H1Q9GZK4 316 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 PLEKHA1Q9HB21 404 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 BEX1Q9HBH7 125 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 APC2O95996 2303 aa11.11□□□□□ -0.63
TNFAIP3-209ENST00000619035 RPL36A-HNRNPH2H7BZ11 118 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 GMDSO60547 372 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 APOC1P02654 83 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 RAB11BQ15907 218 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 GLYATL3Q5SZD4 288 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 SFRP4Q6FHJ7 346 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 FAM3DQ96BQ1 224 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 GSTZ1O43708 216 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 DMRTC1Q5HYR2 192 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 DOK3Q7L591 496 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 ADGRE4PQ86SQ3 457 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 CREB3L1Q96BA8 519 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 CACNG6Q9BXT2 260 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 SLC17A5Q9NRA2 495 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 MCUBQ9NWR8 336 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 NKIRAS2Q9NYR9 191 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
TNFAIP3-209ENST00000619035 TMEM272A0A1B0GTI8 110 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR14I1A6ND48 311 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 SMLR1H3BR10 107 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 K7ENP7 123 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 SLC17A2O00624 439 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CTDSPLO15194 276 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CTAG2O75638 210 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 HLA-HP01893 362 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 TCRBP04435 133 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CRYGSP22914 178 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 UCNP55089 124 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 GUCA2AQ02747 115 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 HGFACQ04756 655 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 SNAI3Q3KNW1 292 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 ZFP69Q49AA0 526 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 PABPC1L2AQ5JQF8 200 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 BAIAP2L2Q6UXY1 529 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 RNF144BQ7Z419 303 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 RBMXL3Q8N7X1 1067 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR5D14Q8NGL3 314 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CAPSLQ8WWF8 208 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 MRI1Q9BV20 369 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 DPAGT1Q9H3H5 408 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 ETV7Q9Y603 341 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 DMXL2Q8TDJ6 3036 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR6C6A6NF89 314 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CENPXA8MT69 81 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 LCATP04180 440 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CD79AP11912 226 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 HLA-DMAP28067 261 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 HTR2CP28335 458 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 BDKRB2P30411 391 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 ECH1Q13011 328 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 SF3B4Q15427 424 aaKnown RBP eCLIP11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 BEST4Q8NFU0 473 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 OR2AE1Q8NHA4 323 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 FCAMRQ8WWV6 532 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 GMPPAQ96IJ6 420 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 TP63Q9H3D4 680 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 HRASLSQ9HDD0 168 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 FLVCR2Q9UPI3 526 aa11.09□□□□□ -0.63
TNFAIP3-209ENST00000619035 MEGF11A6BM72 1044 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 CRYABP02511 175 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 MMP7P09237 267 aaPredicted RBP11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 RAB3AP20336 220 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 FAM166AQ6J272 317 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 ZNF585AQ6P3V2 769 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 OR52N4Q8NGI2 321 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
TNFAIP3-209ENST00000619035 ZNF486Q96H40 463 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms