RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.4
SSBP2-220ENST00000615665 CIB4A0PJX0 185 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 CBR3O75828 277 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.4
SSBP2-220ENST00000615665 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.4
SSBP2-220ENST00000615665 CBR1P16152 277 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 EFNA3P52797 238 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 EFNB2P52799 333 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 C17orf107Q6ZR85 190 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 MCHR2Q969V1 340 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 CMBLQ96DG6 245 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 PAPOLGQ9BWT3 736 aaKnown RBP12.52□□□□□ -0.4
SSBP2-220ENST00000615665 CHRNA10Q9GZZ6 450 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 PCDHGA1Q9Y5H4 931 aa12.52□□□□□ -0.4
SSBP2-220ENST00000615665 H3BUI4 141 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 TNFSF11O14788 317 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 TNFSF12O43508 249 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 OR52W1Q6IF63 320 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 C6orf15Q6UXA7 325 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-220ENST00000615665 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-220ENST00000615665 AIFM2Q9BRQ8 373 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 CNTD2Q9H8S5 307 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 ZFP57Q9NU63 452 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 FADS1O60427 444 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 CPN1P15169 458 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 RAB6AP20340 208 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 ZNF133P52736 654 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-220ENST00000615665 FIP1L1Q6UN15 594 aaKnown RBP12.52□□□□□ -0.41
SSBP2-220ENST00000615665 NHLRC1Q6VVB1 395 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 LIX1LQ8IVB5 337 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 OR2I1PQ8NGU4 316 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 LIPHQ8WWY8 451 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 ASB13Q8WXK3 278 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 ZNF286AQ9HBT8 521 aa12.52□□□□□ -0.41
SSBP2-220ENST00000615665 A0A0B4J2A0 478 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 C17orf51A8MQB3 221 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 SHBQ15464 509 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 UNQ6126/PRO20091Q6UXV3 157 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 MARCH1Q8TCQ1 289 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 HRH4Q9H3N8 390 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 SHPKQ9UHJ6 478 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
SSBP2-220ENST00000615665 CXCL13O43927 109 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
SSBP2-220ENST00000615665 CLLU1Q5K131 121 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
SSBP2-220ENST00000615665 C1orf123Q9NWV4 160 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 OCIAD1Q9NX40 245 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 FBXO4Q9UKT5 387 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 IGHV5-10-1A0A0J9YXX1 117 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 A0A1B0GTQ1 180 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 OR2F2O95006 317 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 ZNF16P17020 682 aaPredicted RBP12.51□□□□□ -0.41
SSBP2-220ENST00000615665 IL11P20809 199 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 OR2F1Q13607 317 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 ARHGEF39Q8N4T4 335 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 OR52H1Q8NGJ2 320 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 APLNRP35414 380 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 NICN1Q9BSH3 213 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 GLS2Q9UI32 602 aa12.51□□□□□ -0.41
SSBP2-220ENST00000615665 A0A0B4J293 547 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 FAHP16930 419 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 ZNF169Q14929 603 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 OR6X1Q8NH79 312 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 SOSTQ9BQB4 213 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 IGLV1-36A0A0B4J1U3 117 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 SDCBPO00560 298 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 IGHV3-9P01782 118 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 FZD5Q13467 585 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
SSBP2-220ENST00000615665 SMIM3Q9BZL3 60 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 CALHM2Q9HA72 323 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 RPS10P5Q9NQ39 176 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 MGMTP16455 207 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 SERPINF1P36955 418 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 P2RX3P56373 397 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 LINC00696Q6ZRV3 163 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 LRRTM1Q86UE6 522 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
SSBP2-220ENST00000615665 ABCA7Q8IZY2 2146 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms