RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CFAP77Q6ZQR2 320 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 PTCHD4Q6ZW05 846 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 MBOAT2Q6ZWT7 520 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 RRM2BQ7LG56 351 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 BEND2Q8NDZ0 799 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 OR4F17Q8NGA8 305 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 OR2AJ1Q8NGZ0 328 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 TSPEARQ8WU66 669 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 TSSK2Q96PF2 358 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 OR4F4Q96R69 305 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 CCL13Q99616 98 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 FAM234AQ9H0X4 552 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 MMP28Q9H239 520 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 RAB18Q9NP72 206 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 MAB21L2Q9Y586 359 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 A0A087WUU8 490 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 NDUFB3O43676 98 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 IFNW1P05000 195 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 TPTEP56180 551 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 EMX1Q04741 257 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 IKZF1Q13422 519 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 PCK2Q16822 640 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 WDR38Q5JTN6 314 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 TMPRSS11FQ6ZWK6 438 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 LNX2Q8N448 690 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 FAM216BQ8N7L0 139 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 OR8J3Q8NGG0 315 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 OR51G2Q8NGK0 314 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 LRRC29Q8WV35 223 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 H1FXQ92522 213 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 DMRTB1Q96MA1 342 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 SSX3Q99909 188 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 NRIP3Q9NQ35 241 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 C14orf119Q9NWQ9 140 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 MRPL15Q9P015 296 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 TMEM5Q9Y2B1 443 aa14.06□□□□□ -0.16
CSNK1E-215ENST00000612795 M0R135 149 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 MUC1P15941 1255 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 KDELR2P33947 212 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 MDH1P40925 334 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 RPS6KA3P51812 740 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 SELENOWP63302 87 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 ELF3P78545 371 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 ACSM1Q08AH1 577 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 ZBTB37Q5TC79 503 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 NCR3LG1Q68D85 454 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 SLC18B1Q6NT16 456 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 TBPL2Q6SJ96 375 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 Q8N7P7 452 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 DTX3Q8N9I9 347 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 OR2AE1Q8NHA4 323 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 TLCD1Q96CP7 247 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 ZNF799Q96GE5 643 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 FAM46AQ96IP4 442 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 NPFFR1Q9GZQ6 430 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 PRPF19Q9UMS4 504 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 IER3IP1Q9Y5U9 82 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 SNX13Q9Y5W8 968 aa14.05□□□□□ -0.16
CSNK1E-215ENST00000612795 COL7A1Q02388 2944 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 DCTN6O00399 190 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 BHLHE40O14503 412 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 PPP1R3DO95685 299 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 LHBP01229 141 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 GRK5P34947 590 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 UBE2E1P51965 193 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 ZNF92Q03936 586 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 LRRC75BQ2VPJ9 315 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SNAI3Q3KNW1 292 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SLC36A3Q495N2 470 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 LRRC10Q5BKY1 277 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 TSEN54Q7Z6J9 526 aaKnown RBP14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SLC26A10Q8NG04 563 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 OR8S1Q8NH09 359 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SLC7A13Q8TCU3 470 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SPTSSAQ969W0 71 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 GPX7Q96SL4 187 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 DCTN5Q9BTE1 182 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 SIGLEC7Q9Y286 467 aa14.04□□□□□ -0.16
CSNK1E-215ENST00000612795 IGLV1-36A0A0B4J1U3 117 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 FAM220BPB1ANY3 271 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 ACOT8O14734 319 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 FFAR1O14842 300 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 HLA-DQA2P01906 255 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 CD33P20138 364 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 CDKN2AP42771 156 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 RFX4Q33E94 735 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 PGBD2Q6P3X8 592 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 VTCN1Q7Z7D3 282 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 NDUFA11Q86Y39 141 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 OR56B2PQ8NGI1 322 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 NKX3-1Q99801 234 aaPredicted RBP14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 RNPEPL1Q9HAU8 725 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 SRA1Q9HD15 236 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 B9D1Q9UPM9 204 aa14.03□□□□□ -0.16
CSNK1E-215ENST00000612795 A0A1W2PQ09 198 aa14.02□□□□□ -0.17
CSNK1E-215ENST00000612795 NKX6-3A6NJ46 265 aa14.02□□□□□ -0.17
CSNK1E-215ENST00000612795 FXYD1O00168 92 aa14.02□□□□□ -0.17
CSNK1E-215ENST00000612795 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms