RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ONECUT1Q9UBC0 465 aa19.21■□□□□ 0.67
MMP28-203ENST00000612672 KAAG1Q9UBP8 84 aa19.21■□□□□ 0.67
MMP28-203ENST00000612672 FOXJ3Q9UPW0 622 aa19.21■□□□□ 0.67
MMP28-203ENST00000612672 TRBV4-1A0A0J9YWV2 114 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 LOC100653049A0A140TA62 436 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.2■□□□□ 0.66
MMP28-203ENST00000612672 KRT34O76011 436 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 FBP1P09467 338 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 CRABP1P29762 137 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 SF3A3Q12874 501 aaKnown RBP eCLIP19.2■□□□□ 0.66
MMP28-203ENST00000612672 MALLQ13021 153 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 GLYATL3Q5SZD4 288 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 DPY19L2P2Q6ZN68 376 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 C11orf53Q8IXP5 236 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 FAM216BQ8N7L0 139 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 CCL13Q99616 98 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 FAM96BQ9Y3D0 163 aa19.2■□□□□ 0.66
MMP28-203ENST00000612672 A0A1B0GVI7 797 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 MEGF11A6BM72 1044 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 BBIP1A8MTZ0 92 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 M0R135 149 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 CXCR6O00574 342 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 NDUFA2O43678 99 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 GMDSO60547 372 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 SELLP14151 372 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 AMY2BP19961 511 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 PCK2Q16822 640 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 WDR38Q5JTN6 314 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 PLPP7Q8NBV4 271 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 TNFRSF14Q92956 283 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 ZNF799Q96GE5 643 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 ERMAPQ96PL5 475 aaPredicted RBP19.19■□□□□ 0.66
MMP28-203ENST00000612672 NDEL1Q9GZM8 345 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 PPA2Q9H2U2 334 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 ANKRD19PQ9H560 264 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 RPRD1BQ9NQG5 326 aaKnown RBP19.19■□□□□ 0.66
MMP28-203ENST00000612672 ENPP4Q9Y6X5 453 aa19.19■□□□□ 0.66
MMP28-203ENST00000612672 UNC119BA6NIH7 251 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 A6NLC8 198 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 ECDO95905 644 aaPredicted RBP19.18■□□□□ 0.66
MMP28-203ENST00000612672 SERPINA1P01009 418 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 HIST1H1CP16403 213 aaKnown RBP19.18■□□□□ 0.66
MMP28-203ENST00000612672 RPS6KA3P51812 740 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 HERPUD1Q15011 391 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 RFX4Q33E94 735 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 DNM1P34Q6PK57 102 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 METAP1DQ6UB28 335 aaPredicted RBP19.18■□□□□ 0.66
MMP28-203ENST00000612672 C1orf122Q6ZSJ8 110 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 ZBTB46Q86UZ6 589 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 OR56B2PQ8NGI1 322 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 OR4K13Q8NH42 304 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 C17orf50Q8WW18 174 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 FUZQ9BT04 418 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 SLC22A4Q9H015 551 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 PPP1R3EQ9H7J1 279 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 SAR1AQ9NR31 198 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 FBLN5Q9UBX5 448 aa19.18■□□□□ 0.66
MMP28-203ENST00000612672 hCG_1807616A0A1W2PRN6 198 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 NPFFO15130 113 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 DIRAS1O95057 198 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 TFF1P04155 84 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 TGFBR2P37173 567 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 EFNB2P52799 333 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 CSNK2BP67870 215 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 ECH1Q13011 328 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 FGD3Q5JSP0 725 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 LYPD4Q6UWN0 246 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 RRM2BQ7LG56 351 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 SLC15A3Q8IY34 581 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 LNX2Q8N448 690 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 ZNRF4Q8WWF5 429 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 RCN3Q96D15 328 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 ITPKCQ96DU7 683 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 TRIM36Q9NQ86 728 aa19.17■□□□□ 0.66
MMP28-203ENST00000612672 MRPL15Q9P015 296 aaKnown RBP19.17■□□□□ 0.66
MMP28-203ENST00000612672 A0A1W2PRQ8 180 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 OR6C68A6NDL8 312 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 GGT3PA6NGU5 568 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 NME4O00746 187 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 ACOT8O14734 319 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 GPR37O15354 613 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 H1F0P07305 194 aaKnown RBP19.16■□□□□ 0.66
MMP28-203ENST00000612672 OTX1P32242 354 aaPredicted RBP19.16■□□□□ 0.66
MMP28-203ENST00000612672 SAA4P35542 130 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 TPTEP56180 551 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 LIPEQ05469 1076 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 DGCR6Q14129 220 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 CGB2Q6NT52 195 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 SMARCD3Q6STE5 483 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 CFHR4Q92496 578 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 NDUFAF4Q9P032 175 aa19.16■□□□□ 0.66
MMP28-203ENST00000612672 SLC2A1P11166 492 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 NCK1P16333 377 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 PAX6P26367 422 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 GABRA5P31644 462 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 C11orf91Q3C1V1 193 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 OXLD1Q5BKU9 147 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 FKBP9P1Q75LS8 142 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 LYG1Q8N1E2 194 aa19.15■□□□□ 0.66
MMP28-203ENST00000612672 SDR9C7Q8NEX9 313 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms