RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ABCD3P28288 659 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 CAPZBP47756 277 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 ID4P47928 161 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 MMP16P51512 607 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 TAS2R31P59538 309 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PCK2Q16822 640 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 COL13A1Q5TAT6 717 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PRSS54Q6PEW0 395 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PGAP1Q75T13 922 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 OR10S1Q8NGN2 331 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 ADAMTS17Q8TE56 1095 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PBOV1Q9GZY1 135 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PCDH15Q96QU1 1955 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 THADAQ6YHU6 1953 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 ZNF354AO60765 605 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 SFT2D2O95562 160 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 TBPP20226 339 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 NME2P22392 152 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 RPL7L1Q6DKI1 246 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 GRINAQ7Z429 371 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 SLAMF6Q96DU3 332 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 UQCC2Q9BRT2 126 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 EMC6Q9BV81 110 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 LRRC61Q9BV99 259 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
PCDHGB1-202ENST00000611598 COLCA2A8K830 154 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 NUDT19A8MXV4 375 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 NPIPA5E9PKD4 350 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 HTR3BO95264 441 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 APOC1P02654 83 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 SERPINA5P05154 406 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 HEXAP06865 529 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 ACAA1P09110 424 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 GABRG2P18507 467 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 AKR1C3P42330 323 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 PTGFRP43088 359 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 SLC6A9P48067 706 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 CAV2P51636 162 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 GPR85P60893 370 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 POU3F1Q03052 451 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 GLIPR1L1Q6UWM5 242 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 OR51E1Q8TCB6 317 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 TMEM41AQ96HV5 264 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 AQP10Q96PS8 301 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 SLC5A7Q9GZV3 580 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 NPIPA1Q9UND3 350 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 IGKV3D-11A0A0A0MRZ8 115 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 A0A1W2PQD3 144 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 PRSS44E7EML9 344 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 PRAMEF26H0Y7S4 382 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 SLC2A1P11166 492 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 OR3A4PP47883 348 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 TDGQ13569 410 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 C16orf47Q6ZP98 133 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 C11orf40Q8WZ69 217 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 CDC6Q99741 560 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 RTBDNQ9BSG5 229 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 WWTR1Q9GZV5 400 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 DUSP15Q9H1R2 295 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 RAB18Q9NP72 206 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 GSKIPQ9P0R6 139 aa13.41□□□□□ -0.26
PCDHGB1-202ENST00000611598 RNASEK-C17orf49H0YIS7 233 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 SDCBPO00560 298 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 MED6O75586 246 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 CSTBP04080 98 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 LYL1P12980 280 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 TMEM50BP56557 158 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 FOXL2P58012 376 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 S100A10P60903 97 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 SNRPEP62304 92 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 FOXK1P85037 733 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 HABP2Q14520 560 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 SMAD2Q15796 467 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 ZNF248Q8NDW4 579 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 OR5D14Q8NGL3 314 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 MAFIPQ8WZ33 124 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 RAB3CQ96E17 227 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 METTL8Q9H825 291 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 FANCFQ9NPI8 374 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 HIST1H1DP16402 221 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 CD80P33681 288 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 F2RL1P55085 397 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 PEA15Q15121 130 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 SWI5Q1ZZU3 235 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 OR13G1Q8NGZ3 307 aa13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 MRPS28Q9Y2Q9 187 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-202ENST00000611598 HOXB5P09067 269 aa13.39□□□□□ -0.27
PCDHGB1-202ENST00000611598 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-202ENST00000611598 CBR1P16152 277 aa13.39□□□□□ -0.27
PCDHGB1-202ENST00000611598 GLRA1P23415 457 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms