RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
SYMPK-215ENST00000600237 CORO2AQ92828 525 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 WDR89Q96FK6 387 aaPredicted RBP13.1□□□□□ -0.31
SYMPK-215ENST00000600237 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 PARP12Q9H0J9 701 aaKnown RBP13.1□□□□□ -0.31
SYMPK-215ENST00000600237 MED9Q9NWA0 146 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 HIF1ANQ9NWT6 349 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 URGCP-MRPS24S4R325 110 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 BCL2L11O43521 198 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 PRSS23O95084 383 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 LIMS3P0CW19 117 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 LIMS4P0CW20 117 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 SUB1P53999 127 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYMPK-215ENST00000600237 SCAND1P57086 179 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 C21orf58P58505 322 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 DHODHQ02127 395 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
SYMPK-215ENST00000600237 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 CMTM2Q8TAZ6 248 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 SHARPINQ9H0F6 387 aa13.1□□□□□ -0.31
SYMPK-215ENST00000600237 ANKUB1A6NFN9 424 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 LRP3O75074 770 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 IGHA2P01877 340 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 NPBWR1P48145 328 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 MENTQ9BUN1 341 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 MMP25Q9NPA2 562 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ING1Q9UK53 422 aaPredicted RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 CXCL13O43927 109 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 FABP1P07148 127 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 PTAFRP25105 342 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 PCBP4P57723 403 aaKnown RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 RELL2Q8NC24 303 aaPredicted RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 U3KQ87 197 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 OR2J2O76002 312 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 NXPH3O95157 252 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ATF1P18846 271 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 PI3P19957 117 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 RDH5Q92781 318 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 REEP6Q96HR9 211 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 K7EQM0 130 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 MBP02144 154 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 SPNP16150 400 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 CLLU1Q5K131 121 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ALG14Q96F25 216 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 TECTBQ96PL2 329 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 NDUFB6O95139 128 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 DTYMKP23919 212 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 THBS4P35443 961 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 HLA-BQ31612 363 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ELFN2Q5R3F8 820 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 RPUSD3Q6P087 351 aaKnown RBP13.09□□□□□ -0.31
SYMPK-215ENST00000600237 OR10P1Q8NGE3 313 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 HMGCLL1Q8TB92 370 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 FBXW5Q969U6 566 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 LAMP3Q9UQV4 416 aa13.09□□□□□ -0.31
SYMPK-215ENST00000600237 ZNF121P58317 390 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 FOXF1Q12946 379 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 NIT2Q9NQR4 276 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 CBR3O75828 277 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 GSK3AP49840 483 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 PCBP3P57721 371 aaKnown RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 ENDOGQ14249 297 aaKnown RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 LHX4Q969G2 390 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 ORAI1Q96D31 301 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 PELI1Q96FA3 418 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 PLSCR3Q9NRY6 295 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 DEGS2Q6QHC5 323 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 GLCCI1Q86VQ1 547 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 OR1N1Q8NGS0 311 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 BOD1Q96IK1 185 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 ZPBPQ9BS86 351 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 CRLF2Q9HC73 371 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 PYCARD-AS1I3L0S3 204 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 BHLHE40O14503 412 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 PIGPP57054 158 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 SSX1Q16384 188 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
SYMPK-215ENST00000600237 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-215ENST00000600237 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms