RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 PSMB10P40306 273 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 NPY4RP50391 375 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 PRSS12P56730 875 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 FGF12P61328 243 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 RPL13AP3Q6NVV1 102 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
TRIM28-212ENST00000597995 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 ZNF841Q6ZN19 808 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 LNX2Q8N448 690 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 OR52L1Q8NGH7 329 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 OR51L1Q8NGJ5 315 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 OR9Q1Q8NGQ5 310 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 Q8TCH9 128 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 NIPSNAP1Q9BPW8 284 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 THTPAQ9BU02 230 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 CHID1Q9BWS9 393 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 TSSK6Q9BXA6 273 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 HCAR1Q9BXC0 346 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 DGCR6LQ9BY27 220 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 NMNAT2Q9BZQ4 307 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 WDR76Q9H967 626 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 ARMC1Q9NVT9 282 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 SAMHD1Q9Y3Z3 626 aaKnown RBP10.41□□□□□ -0.74
TRIM28-212ENST00000597995 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 C5orf63A6NC05 138 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 P2RY10O00398 339 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 TNFRSF13BO14836 293 aaPredicted RBP10.4□□□□□ -0.74
TRIM28-212ENST00000597995 RAP2AP10114 183 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CLUP10909 449 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 RELBQ01201 579 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 SRSF4Q08170 494 aaKnown RBP10.4□□□□□ -0.74
TRIM28-212ENST00000597995 TRAP1Q12931 704 aaKnown RBP10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CRMP1Q14194 572 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 PDCD1Q15116 288 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 SLC36A3Q495N2 470 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 FAM98BQ52LJ0 330 aaKnown RBP10.4□□□□□ -0.74
TRIM28-212ENST00000597995 FAM201AQ5SY85 155 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CD276Q5ZPR3 534 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 LYPD2Q6UXB3 125 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 TRPM8Q7Z2W7 1104 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CANT1Q8WVQ1 401 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 SLC7A6OSQ96CW6 309 aaPredicted RBP10.4□□□□□ -0.74
TRIM28-212ENST00000597995 PITX2Q99697 317 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 ATF6BQ99941 703 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CDADC1Q9BWV3 514 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CHIAQ9BZP6 476 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 MMP27Q9H306 513 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 REEP1Q9H902 201 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 TBC1D23Q9NUY8 699 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 KIF17Q9P2E2 1029 aa10.4□□□□□ -0.74
TRIM28-212ENST00000597995 CMYA5Q8N3K9 4069 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 C22orf46C9J442 243 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 F5H5K5 113 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 HLA-DQA2P01906 255 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 GYPBP06028 91 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 MELTFP08582 738 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 CD200P41217 278 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 RAD23AP54725 363 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 MAB21L1Q13394 359 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 LINC01590Q5TEZ4 76 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 CD300LDQ6UXZ3 194 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 BHLHE23Q8NDY6 225 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 PROKR2Q8NFJ6 384 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 OR10G2Q8NGC3 310 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 SSMEM1Q8WWF3 244 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 FEVQ99581 238 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 MARCH7Q9H992 704 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 TNFRSF19Q9NS68 423 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
TRIM28-212ENST00000597995 AQP12BA6NM10 295 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 ZNF879B4DU55 563 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 CST1P01037 141 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 HLA-DPB1P04440 258 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 MMP9P14780 707 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 SPI1P17947 270 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 OTX1P32242 354 aaPredicted RBP10.38□□□□□ -0.75
TRIM28-212ENST00000597995 CFHR2P36980 270 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 SLC25A1P53007 311 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 ECH1Q13011 328 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 GK2Q14410 553 aaPredicted RBP10.38□□□□□ -0.75
TRIM28-212ENST00000597995 PCK2Q16822 640 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 SNAI3Q3KNW1 292 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 RHOUQ7L0Q8 258 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 AQP12AQ8IXF9 295 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 HS3ST5Q8IZT8 346 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 IQCF1Q8N6M8 205 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 OR2T33Q8NG76 320 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 OR2AJ1Q8NGZ0 328 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 OR2T4Q8NH00 348 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 TBC1D15Q8TC07 691 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 BCAS4Q8TDM0 211 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 GATAD2BQ8WXI9 593 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 DYRK2Q92630 601 aa10.38□□□□□ -0.75
TRIM28-212ENST00000597995 LRGUKQ96M69 825 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms