RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 IGHV2OR16-5A0A0B4J2B6 119 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 A0A1W2PPK0 400 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 SMPD2O60906 423 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 DHRS3O75911 302 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 NGFP01138 241 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 THBDP07204 575 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 ZNF35P13682 527 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 MYL9P24844 172 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 SERPINB10P48595 397 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 CCDC54Q8NEL0 328 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 OR5L1Q8NGL2 311 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 DCSTAMPQ9H295 470 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
VRK3-212ENST00000596814 HCFC1P51610 2035 aa12.66□□□□□ -0.38
VRK3-212ENST00000596814 TRBV5-7A0A0A0MS05 114 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 A0A1W2PPW3 197 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 PIN1P1O15428 100 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 MTRF1O75570 445 aaKnown RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 RAF1P04049 648 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 FAM157BP0CG42 384 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 CFL1P23528 166 aaKnown RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 PCSK6P29122 969 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 CALCRP30988 508 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 ZNF92Q03936 586 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 CNPY1Q3B7I2 92 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 UNQ6126/PRO20091Q6UXV3 157 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 SPSB4Q96A44 273 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 PTTG3PQ9NZH4 202 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 STARD10Q9Y365 291 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 HEATR1Q9H583 2144 aaKnown RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 LOC390937A0A1W2PQ73 354 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 TRIM64BA6NI03 449 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 LMX1BO60663 402 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 TMEM108Q6UXF1 575 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 Q6ZSR3 168 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.38
VRK3-212ENST00000596814 OR14K1Q8NGZ2 314 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 POFUT1Q9H488 388 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 OPA3Q9H6K4 179 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 V9GYS6 101 aa12.65□□□□□ -0.38
VRK3-212ENST00000596814 CHD6Q8TD26 2715 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 CASKO14936 926 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 CDRT1O95170 752 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 CRYAAP02489 173 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 ZNF20P17024 532 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 CD40P25942 277 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 SDC2P34741 201 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 MTNR1BP49286 362 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 UCP2P55851 309 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 PPP1CBP62140 327 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 FAM3AP98173 230 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 GK2Q14410 553 aaPredicted RBP12.64□□□□□ -0.39
VRK3-212ENST00000596814 FGGYQ96C11 551 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
VRK3-212ENST00000596814 TRAV1-2A0A0B4J238 106 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SHISA3A0PJX4 238 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 DHRS7CA6NNS2 312 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 IL1AP01583 271 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 FSTP19883 344 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 PTAFRP25105 342 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 RAD52P43351 418 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 MXD1Q05195 221 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SNTB1Q13884 538 aaKnown RBP12.63□□□□□ -0.39
VRK3-212ENST00000596814 OR8B8Q15620 311 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SEMA6DQ8NFY4 1073 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 OR1J1Q8NGS3 322 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
VRK3-212ENST00000596814 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
VRK3-212ENST00000596814 BCL2L14Q9BZR8 327 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SLITRK2Q9H156 845 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 TCF7L1Q9HCS4 588 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
VRK3-212ENST00000596814 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
VRK3-212ENST00000596814 SPTBN1Q01082 2364 aaKnown RBP12.63□□□□□ -0.39
VRK3-212ENST00000596814 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 EPXP11678 715 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SRMP19623 302 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ACKR3P25106 362 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 GNALP38405 381 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 MAP2K3P46734 347 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 GSK3AP49840 483 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 PRSS12P56730 875 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ERVS71-1P61550 626 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SPOCK1Q08629 439 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms