RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 KIR3DL2P43630 455 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 CSNK1A1P48729 337 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 DAP3P51398 398 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 MRPS10P82664 201 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 HACD4Q5VWC8 232 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 SOX7Q9BT81 388 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 MTFP1Q9UDX5 166 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 CADP27708 2225 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 PHYHO14832 338 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 HSPA12AO43301 675 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC37A1P57057 533 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 FAM122BQ7Z309 247 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 PXKQ7Z7A4 578 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 LINC00518Q8N0U6 118 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 TM4SF19Q96DZ7 209 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 PRRT1Q99946 306 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 THSD7BQ9C0I4 1608 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 IGKV1D-42A0A075B6H8 117 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC17A2O00624 439 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 NME2P1O60361 137 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 IGHG1P01857 330 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 RNF4P78317 190 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 ULBP2Q9BZM5 246 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 CXorf51AA0A1B0GTR3 108 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 A0A1B0GX78 115 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 ANKRD20A5PA0PJZ0 165 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 INSM1Q01101 510 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 ACY1Q03154 408 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 FHL5Q5TD97 284 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 LDAHQ9H6V9 325 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 POLE3Q9NRF9 147 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF217O75362 1048 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 TGM6O95932 706 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 NME1P15531 152 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF121P58317 390 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 GABREP78334 506 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 GABRG3Q99928 467 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 GAREM1Q9H706 876 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 A0A0D9SG52 128 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 CRYBA1P05813 215 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 CELA2AP08217 269 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 CAMLGP49069 296 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 HERV-K104P61576 105 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 RPS11P62280 158 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 SKP2Q13309 424 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 IAH1Q2TAA2 248 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 PLEKHN1Q494U1 663 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF626Q68DY1 528 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 MCEMP1Q8IX19 187 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 PUSL1Q8N0Z8 303 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 SGCZQ96LD1 299 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 CDCA3Q99618 268 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 PBOV1Q9GZY1 135 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 HIF3AQ9Y2N7 669 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 FBXO7Q9Y3I1 522 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 PLXNA3P51805 1871 aa12.29□□□□□ -0.44
CACNA1A-209ENST00000587525 H7C1Q1 480 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 SIGLEC6O43699 453 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 BCKDHBP21953 392 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 CBX5P45973 191 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 OR3A4PP47883 348 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 EGR4Q05215 589 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 MYBPHQ13203 477 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 TSPO2Q5TGU0 170 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 PLXDC2Q6UX71 529 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 OR1M1Q8NGA1 313 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 OR5L1Q8NGL2 311 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 ASB17Q8WXJ9 295 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 AKIRIN1Q9H9L7 192 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 ETV7Q9Y603 341 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 DENND4CQ5VZ89 1909 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 MFSD2BA6NFX1 497 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 SOCS1O15524 211 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 GLRA1P23415 457 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 CD27P26842 260 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 CX3CR1P49238 355 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 EFNB1P98172 346 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF141Q15928 474 aa12.28□□□□□ -0.44
CACNA1A-209ENST00000587525 OGFOD3Q6PK18 319 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms