RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 OR2AE1Q8NHA4 323 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 SLC25A28Q96A46 364 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 REEP6Q96HR9 211 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 ZFP3Q96NJ6 502 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 ZNF71Q9NQZ8 489 aaPredicted RBP17.29■□□□□ 0.36
TRIM47-204ENST00000587339 KIR2DL2P43627 348 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-204ENST00000587339 INPP1P49441 399 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 TGFBR3Q03167 851 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 DPPA2Q7Z7J5 298 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 OR6K3Q8NGY3 331 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 METTL17Q9H7H0 456 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-204ENST00000587339 RABL2AQ9UBK7 228 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-204ENST00000587339 RABL2BQ9UNT1 228 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
TRIM47-204ENST00000587339 TPOP07202 933 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 COX5BP10606 129 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 GABRA1P14867 456 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 PER3P56645 1201 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 PLP2Q04941 152 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 ASAH1Q13510 395 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 Q6ZT83 130 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 GDPD3Q7L5L3 318 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 NANOS1Q8WY41 292 aaKnown RBP17.27■□□□□ 0.36
TRIM47-204ENST00000587339 BCL2L2Q92843 193 aaPredicted RBP17.27■□□□□ 0.36
TRIM47-204ENST00000587339 C10orf35Q96D05 121 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 UQCC2Q9BRT2 126 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 THAP7Q9BT49 309 aaPredicted RBP17.27■□□□□ 0.36
TRIM47-204ENST00000587339 CNTD2Q9H8S5 307 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 NOX3Q9HBY0 568 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 FAIMQ9NVQ4 179 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 ZNF391Q9UJN7 358 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 PIGLQ9Y2B2 252 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 RTTNQ86VV8 2226 aa17.27■□□□□ 0.36
TRIM47-204ENST00000587339 LOC100509620A0A075B734 347 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 CNOT4O95628 575 aaKnown RBP17.27■□□□□ 0.35
TRIM47-204ENST00000587339 FAHP16930 419 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 CCNOP22674 350 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 STOMP27105 288 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 THBS4P35443 961 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 MMP15P51511 669 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 PLA2G7Q13093 441 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 GSG1Q2KHT4 349 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 TMEM69Q5SWH9 247 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 VWA1Q6PCB0 445 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 OR4D6Q8NGJ1 314 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 PP6455Q8WZ26 134 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 RFT1Q96AA3 541 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 RGCCQ9H4X1 137 aa17.27■□□□□ 0.35
TRIM47-204ENST00000587339 ATMQ13315 3056 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 C5orf49A4QMS7 147 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 MBD3L4A6NDZ8 208 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-204ENST00000587339 MBD3L3A6NE82 208 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-204ENST00000587339 MBD3L5A6NJ08 208 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-204ENST00000587339 WDR1O75083 606 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 IGHV1-2P23083 117 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 CDK2P24941 298 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 ZNF93P35789 620 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-204ENST00000587339 CXADRP78310 365 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 FOXF2Q12947 444 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 TBRG1Q3YBR2 411 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 OR5AS1Q8N127 324 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 SEMA6DQ8NFY4 1073 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 MBD3L2Q8NHZ7 208 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-204ENST00000587339 C1QTNF5Q9BXJ0 243 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 KCNK15Q9H427 330 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 B3GNT2Q9NY97 397 aa17.26■□□□□ 0.35
TRIM47-204ENST00000587339 TMEM272A0A1B0GTI8 110 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 FIGNL2A6NMB9 653 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 DHRS7CA6NNS2 312 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 EEF1E1O43324 174 aaKnown RBP17.25■□□□□ 0.35
TRIM47-204ENST00000587339 EFNB2P52799 333 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 CAPZA1P52907 286 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 CHST5Q9GZS9 411 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 CTDSPLO15194 276 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 PLA2G10O15496 165 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 HCKP08631 526 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 TMIGD3P0DMS9 266 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-204ENST00000587339 CCL2P13500 99 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 PTGER4P35408 488 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 ZNF57Q68EA5 555 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-204ENST00000587339 ZNF324BQ6AW86 544 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-204ENST00000587339 COLCA1Q6ZS62 124 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 NRARPQ7Z6K4 114 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 TRIM63Q969Q1 353 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 RHBDD3Q9Y3P4 386 aa17.25■□□□□ 0.35
TRIM47-204ENST00000587339 CACNA1GO43497 2377 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 IGKV1-9A0A0C4DH69 117 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 XRCC2O43543 280 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 SSX4O60224 188 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 CTAG2O75638 210 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 RAD51DO75771 328 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 CCBE1Q6UXH8 406 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-204ENST00000587339 SEM1Q6ZVN7 128 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 UTS2BQ765I0 119 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 CD163Q86VB7 1156 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 CDH26Q8IXH8 852 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 Q8NA96 180 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 PHF21AQ96BD5 680 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms