RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MSR1P21757 451 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 SRP9P49458 86 aaKnown RBP14.88□□□□□ -0.03
TOP3A-220ENST00000585031 CRYBA2P53672 197 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 HERPUD1Q15011 391 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 RFX4Q33E94 735 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 CCBE1Q6UXH8 406 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-220ENST00000585031 FBXW12Q6X9E4 464 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 HDDC2Q7Z4H3 204 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 SYT9Q86SS6 491 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 IGFN1Q86VF2 1251 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 LYG1Q8N1E2 194 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 LIPHQ8WWY8 451 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 C7orf34Q96L11 122 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 ALG12Q9BV10 488 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 USE1Q9NZ43 259 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 A0A1B0GWJ7 208 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 NPIPB13A6NJU9 1138 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 NPIPB4C9JG80 1138 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 IFNW1P05000 195 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 MPPED2Q15777 294 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 CYP4Z1Q86W10 505 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 FGFRL1Q8N441 504 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 DHRSXQ8N5I4 330 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 SCCPDHQ8NBX0 429 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 BHLHE23Q8NDY6 225 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 PPP1R35Q8TAP8 253 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 CFHR4Q92496 578 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 SGCDQ92629 289 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 SGTBQ96EQ0 304 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 RBP7Q96R05 134 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 DPAGT1Q9H3H5 408 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 ZNRD1Q9P1U0 126 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 FBLN5Q9UBX5 448 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 VPREB3Q9UKI3 123 aa14.87□□□□□ -0.03
TOP3A-220ENST00000585031 SAMHD1Q9Y3Z3 626 aaKnown RBP14.87□□□□□ -0.03
TOP3A-220ENST00000585031 LRRC30A6NM36 301 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 C12orf71A8MTZ7 269 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 H7C1C5 153 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 SGCEO43556 437 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 FAM20BO75063 409 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 RAD23AP54725 363 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 DLX1P56177 255 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 RPL27P61353 136 aaKnown RBP14.86□□□□□ -0.03
TOP3A-220ENST00000585031 LCN6P62502 163 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 METTL11BQ5VVY1 283 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 PRAMEF6Q5VXH4 476 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 SFRP4Q6FHJ7 346 aaPredicted RBP14.86□□□□□ -0.03
TOP3A-220ENST00000585031 C1orf87Q8N0U7 546 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 LRRC75AQ8NAA5 344 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 PHF21AQ96BD5 680 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 WWC2-AS2Q96NR7 200 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 ADI1Q9BV57 179 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 GABARAPL1Q9H0R8 117 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 WDR76Q9H967 626 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 UFSP2Q9NUQ7 469 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 KIF17Q9P2E2 1029 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 ENPP4Q9Y6X5 453 aa14.86□□□□□ -0.03
TOP3A-220ENST00000585031 OR6C6A6NF89 314 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 LIPFP07098 398 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 TNFRSF1BP20333 461 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 CAPGP40121 348 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 GATA4P43694 442 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 NPY4RP50391 375 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 EFNB2P52799 333 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 FHL1Q13642 323 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 CCDC92Q53HC0 331 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-220ENST00000585031 ALG10Q5BKT4 473 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 CD276Q5ZPR3 534 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 C1orf122Q6ZSJ8 110 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 Q6ZTK2 550 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 Q8TCH9 128 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 CNBD2Q96M20 576 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 ZNF582Q96NG8 517 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-220ENST00000585031 BATF3Q9NR55 127 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 SCOCQ9UIL1 159 aa14.85□□□□□ -0.03
TOP3A-220ENST00000585031 MEGF11A6BM72 1044 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 IQCF6A8MYZ5 107 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 H0YAE9 185 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 XPNPEP2O43895 674 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 OR10H3O60404 316 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 ALPLP05186 524 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 RHCEP18577 417 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 TGFBR2P37173 567 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 SMIM11AP58511 58 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 CTXN1P60606 82 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 SPIBQ01892 262 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 BTN2A1Q7KYR7 527 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 VMO1Q7Z5L0 202 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 ZNF555Q8NEP9 628 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 TMEM239Q8WW34 195 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 CYGBQ8WWM9 190 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 TFAP2CQ92754 450 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 ANKRD60Q9BZ19 345 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 PPA2Q9H2U2 334 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 NDUFAF4Q9P032 175 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 ERVK-18Q9QC07 812 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 HIF3AQ9Y2N7 669 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 SH3GLB1Q9Y371 365 aa14.84□□□□□ -0.03
TOP3A-220ENST00000585031 K7EIL1 84 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 TNFRSF11BO00300 401 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms