RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RIDAP52758 137 aaKnown RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 CLDN20P56880 219 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 FABP5Q01469 135 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 FMODQ06828 376 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 RASGEF1BQ0VAM2 473 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 SLC17A1Q14916 467 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 DMKNQ6E0U4 476 aaPredicted RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 FCRLAQ7L513 359 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 SSX6Q7RTT6 188 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 CROCCP3Q8IVE0 287 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 GCNT2Q8N0V5 402 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 SLC26A10Q8NG04 563 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 PHYHIPQ92561 330 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 BORCS5Q969J3 196 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 MRPL13Q9BYD1 178 aaKnown RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 PARPBPQ9NWS1 579 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 GLTPQ9NZD2 209 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 NCKAP5O14513 1909 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 JMJD1CQ15652 2540 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 A0A075B6Q4 140 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ARPC4-TTLL3A0A0A6YYG9 625 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 IGHV3-15A0A0B4J1V0 119 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 RNF212BA8MTL3 300 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 CLDN25C9JDP6 229 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 E9PI62 339 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 KRT33AO76009 404 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 RPP14O95059 124 aaKnown RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 QDPRP09417 244 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 H2BFMP0C1H6 154 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 TGFBR1P36897 503 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 RPS19P39019 145 aaKnown RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 PSMB10P40306 273 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 MTNR1BP49286 362 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 STARP49675 285 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ROM1Q03395 351 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 MXD1Q05195 221 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 FAM27E3Q08E93 113 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 TAF13Q15543 124 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 MEP1BQ16820 701 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ZNF829Q3KNS6 432 aaPredicted RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 YIF1BQ5BJH7 314 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 LIPNQ5VXI9 398 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 DEGS2Q6QHC5 323 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 AAED1Q7RTV5 226 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ZNF679Q8IYX0 411 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 GPR137CQ8N3F9 429 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 RFLNBQ8N5W9 214 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ZNF676Q8N7Q3 588 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 OR52N5Q8NH56 324 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 OR5AK2Q8NH90 309 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 MCHR2Q969V1 340 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 SLC25A46Q96AG3 418 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ZC3HAV1LQ96H79 300 aaKnown RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 CLUHP3Q96NS8 147 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 FOXN4Q96NZ1 517 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 WFIKKN1Q96NZ8 548 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 OR8B4Q96RC9 309 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 SRXN1Q9BYN0 137 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 ULBP2Q9BZM5 246 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 SLIRPQ9GZT3 109 aaKnown RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 TPK1Q9H3S4 243 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 RNF167Q9H6Y7 350 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 MRM2Q9UI43 246 aaKnown RBP8.92□□□□□ -0.98
SS18-221ENST00000582448 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 FREM3P0C091 2139 aa8.92□□□□□ -0.98
SS18-221ENST00000582448 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 OR6C65A6NJZ3 312 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 PSMD9O00233 223 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 PDCD5O14737 125 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 MAGEB4O15481 346 aaPredicted RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 RGS5O15539 181 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 RAMP1O60894 148 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 CNOT4O95628 575 aaKnown RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 MPIG6BO95866 241 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 GPANK1O95872 356 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ZNF708P17019 499 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 CALRP27797 417 aaKnown RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 SDC2P34741 201 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 SUCLG1P53597 346 aaKnown RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 ALKBH1Q13686 389 aaKnown RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 ETFDHQ16134 617 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 HIST3H3Q16695 136 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ACSM3Q53FZ2 586 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ZNF684Q5T5D7 378 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ABLIM2Q6H8Q1 611 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 MZT2AQ6P582 158 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms