RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ROS1P08922 2347 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 PLSCR5A0PG75 271 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 B9A039 149 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 SYT7O43581 403 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 PLAUP00749 431 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 SERPINA3P01011 423 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 TTRP02766 147 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 CELP19835 753 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 MAP2K4P45985 399 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 ZNF92Q03936 586 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 MFGE8Q08431 387 aaPredicted RBP12.28□□□□□ -0.44
SKA2-205ENST00000580541 GK2Q14410 553 aaPredicted RBP12.28□□□□□ -0.44
SKA2-205ENST00000580541 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 ZMAT1Q5H9K5 638 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 WDR38Q5JTN6 314 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 UBE2UQ5VVX9 321 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
SKA2-205ENST00000580541 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 KCTD8Q6ZWB6 473 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 MUC15Q8N387 334 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 ZNF611Q8N823 705 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 OR51E1Q8TCB6 317 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 C10orf35Q96D05 121 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 OR5M11Q96RB7 305 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
SKA2-205ENST00000580541 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 GPR84Q9NQS5 396 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 SLC22A13Q9Y226 551 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
SKA2-205ENST00000580541 OR4C45A6NMZ5 311 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 E9PI62 339 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 TIMM8AO60220 97 aaPredicted RBP12.27□□□□□ -0.45
SKA2-205ENST00000580541 CLPTM1O96005 669 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 CD2P06729 351 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 CPEP16870 476 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 KITLGP21583 273 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 PCMT1P22061 227 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ACHEP22303 614 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 PSMA1P25786 263 aaKnown RBP12.27□□□□□ -0.45
SKA2-205ENST00000580541 COL8A1P27658 744 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 TTKP33981 857 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 GTF2A1P52655 376 aaPredicted RBP12.27□□□□□ -0.45
SKA2-205ENST00000580541 SLC3A1Q07837 685 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 RIPPLY1Q0D2K3 151 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 TPBGQ13641 420 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 EFNB3Q15768 340 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ADIPOQQ15848 244 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 YIF1BQ5BJH7 314 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 SPATA46Q5T0L3 261 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 PRSS35Q8N3Z0 413 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 GPR148Q8TDV2 347 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 GHSRQ92847 366 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 MS4A5Q9H3V2 200 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ABCB9Q9NP78 766 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 SCOCQ9UIL1 159 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 ST6GALNAC2Q9UJ37 374 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 PMF1-BGLAPU3KQ54 211 aa12.27□□□□□ -0.45
SKA2-205ENST00000580541 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 ANKRD30BLA7E2S9 258 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 P2RY10O00398 339 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 DHRS3O75911 302 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 ZFPL1O95159 310 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 PSMB9P28065 219 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 GSK3AP49840 483 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 NANOS3P60323 173 aaKnown RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 SNRPD2P62316 118 aaKnown RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 FAM3AP98173 230 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 PSG7Q13046 419 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 HLXQ14774 488 aaPredicted RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 NEDD8Q15843 81 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 NKPD1Q17RQ9 610 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 ODF4Q2M2E3 257 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 SYT6Q5T7P8 510 aaPredicted RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 OR2AE1Q8NHA4 323 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 LILRB1Q8NHL6 650 aaPredicted RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 RPS4Y2Q8TD47 263 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 PLEKHA1Q9HB21 404 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 NEK6Q9HC98 313 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 CBLN4Q9NTU7 201 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 ZNF319Q9P2F9 582 aa12.26□□□□□ -0.45
SKA2-205ENST00000580541 PURGQ9UJV8 347 aaKnown RBP12.26□□□□□ -0.45
SKA2-205ENST00000580541 TRIM64CA6NLI5 447 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 CD300LBA8K4G0 201 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 IQCF6A8MYZ5 107 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 IGLV3-1P01715 115 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 JUNBP17275 347 aaPredicted RBP12.25□□□□□ -0.45
SKA2-205ENST00000580541 CCL1P22362 96 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
SKA2-205ENST00000580541 GNALP38405 381 aa12.25□□□□□ -0.45
SKA2-205ENST00000580541 KIR3DL2P43630 455 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms