RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 MRPS28Q9Y2Q9 187 aaKnown RBP15.28■□□□□ 0.04
TOM1L1-221ENST00000575882 SPTBN5Q9NRC6 3674 aaKnown RBP15.28■□□□□ 0.04
TOM1L1-221ENST00000575882 NPIPB13A6NJU9 1138 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 PCP4L1A6NKN8 68 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 SHISA8B8ZZ34 492 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 NPIPB4C9JG80 1138 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 MPIG6BO95866 241 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 CHRM2P08172 466 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 GLULP15104 373 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 ABOP16442 354 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 GPR85P60893 370 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 FOXK1P85037 733 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 NAAAQ02083 359 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 SLC9A3R2Q15599 337 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 SGCAQ16586 387 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 PNLIPRP3Q17RR3 467 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 COMMD2Q86X83 199 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 TMEM230Q96A57 120 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 RAB3CQ96E17 227 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 RAB33BQ9H082 229 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 C5orf66Q9H5L9 145 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 VCANP13611 3396 aa15.27■□□□□ 0.04
TOM1L1-221ENST00000575882 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 F8W036 122 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 SOCS1O15524 211 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 ADAP1O75689 374 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 APOBEC1P41238 236 aaKnown RBP15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 OR1D5P58170 312 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 RNF4P78317 190 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 BLOC1S1P78537 153 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 FOXF1Q12946 379 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 HFEQ30201 348 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 CBLN2Q8IUK8 224 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 THAP3Q8WTV1 239 aaPredicted RBP15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 DDIT4LQ96D03 193 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 CYYR1Q96J86 154 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 PRR13Q9NZ81 148 aa15.27■□□□□ 0.03
TOM1L1-221ENST00000575882 FOLR1P15328 257 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 CD38P28907 300 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 OR3A4PP47883 348 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 C14orf28Q4W4Y0 310 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 BHLHE23Q8NDY6 225 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 CDC6Q99741 560 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 SOX7Q9BT81 388 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 BANF2Q9H503 90 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 MLXQ9UH92 298 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 GPR132Q9UNW8 380 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 MSGN1A6NI15 193 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 ZNF354AO60765 605 aaPredicted RBP15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 GSTP1P09211 210 aaKnown RBP15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 HIST1H1DP16402 221 aaKnown RBP15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 PI3P19957 117 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 LAP3P28838 519 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 C17orf67Q0P5P2 114 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 VAX1Q5SQQ9 334 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 CLEC18BQ6UXF7 455 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 SERINC1Q9NRX5 453 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 POLR1DQ9Y2S0 133 aa15.26■□□□□ 0.03
TOM1L1-221ENST00000575882 LIPT2A6NK58 231 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 CDC14BO60729 498 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 RAD51DO75771 328 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 SFT2D2O95562 160 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 SLC2A1P11166 492 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 ABHD12BQ7Z5M8 362 aaPredicted RBP15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 OR5AS1Q8N127 324 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 ARRDC1Q8N5I2 433 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 OR4A4PQ8NGN8 299 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 C1orf147Q96MC9 270 aaPredicted RBP15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 CNTNAP3BQ96NU0 1288 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 TMEM231Q9H6L2 316 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 SEC61A2Q9H9S3 476 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 SLC2A4RGQ9NR83 387 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 ANAPC10Q9UM13 185 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 FLVCR1Q9Y5Y0 555 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 LHFPL6Q9Y693 200 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 A0A1B0GX78 115 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 A0A1W2PP11 408 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 ACTBL2Q562R1 376 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 H3F3CQ6NXT2 135 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 NAA40Q86UY6 237 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 MESP1Q9BRJ9 268 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 TLNRD1Q9H1K6 362 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 RAB18Q9NP72 206 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 TREM1Q9NP99 234 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 ALKBH4Q9NXW9 302 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 OR5AC2Q9NZP5 309 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 KLHL13Q9P2N7 655 aa15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 KLF2Q9Y5W3 355 aaPredicted RBP15.25■□□□□ 0.03
TOM1L1-221ENST00000575882 VSTM2BA6NLU5 285 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 F12P00748 615 aaPredicted RBP15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 FAM157CP0CG43 387 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 GIMD1P0DJR0 217 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 PVALBP20472 110 aaPredicted RBP15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 SMAD2Q15796 467 aaKnown RBP15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 C10orf91Q5T1B1 145 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 ZNF585AQ6P3V2 769 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 KCNG3Q8TAE7 436 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 TMEM59Q9BXS4 323 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 MMP26Q9NRE1 261 aa15.24■□□□□ 0.03
TOM1L1-221ENST00000575882 B3GAT1Q9P2W7 334 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms