RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 F11RQ9Y624 299 aaKnown RBP1.55□□□□□ -2.16
CHD3-217ENST00000574022 PRSS21Q9Y6M0 314 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 ABCB11O95342 1321 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 RAD50Q92878 1312 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 TNRQ92752 1358 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 PDS5BQ9NTI5 1447 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 WDR62O43379 1518 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 UNC13AQ9UPW8 1703 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 TRAV8-4A0A0B4J246 113 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 FAM240AA0A1B0GVK7 77 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SLC5A10A0PJK1 596 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ISPDA4D126 451 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 KRTAP29-1A8MX34 341 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 SRRM5B3KS81 715 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 KRTAP4-16G5E9R7 235 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 KLRC4-KLRK1H3BQV0 150 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 M0R1B8 84 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZNF593O00488 134 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 TOX3O15405 576 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 CRXO43186 299 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 CTNSO60931 367 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ADAP1O75689 374 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SUPT7LO94864 414 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 KLF8O95600 359 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 SNAP29O95721 258 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 IGKV3-20P01619 116 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 CD8AP01732 235 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 P01737 135 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 BGLAPP02818 100 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 THY1P04216 161 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SLC35G6P0C7Q6 338 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZDHHC11BP0C7U3 371 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 GGT2P36268 569 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 CDC34P49427 236 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 OR12D2P58182 307 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 UBE2NP61088 152 aaKnown RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 HERVK_113P61574 105 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 CACNG7P62955 275 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 HMGCS1Q01581 520 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 PRKCDQ05655 676 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SMARCB1Q12824 385 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RAB31Q13636 194 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 KIR2DS1Q14954 304 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 TRAM1Q15629 374 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 EXOC3L4Q17RC7 722 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 TTLL9Q3SXZ7 439 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 CCDC14Q49A88 953 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RBM48Q5RL73 367 aaKnown RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 MFSD14CQ5VZR4 134 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 HBMQ6B0K9 141 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 DNAJC24Q6P3W2 148 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 CLEC18BQ6UXF7 455 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZNF497Q6ZNH5 498 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 Q6ZT83 130 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 FAM19A1Q7Z5A9 133 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SLC7A5P1Q8MH63 180 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 FAM71E2Q8N5Q1 922 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 METTL13Q8N6R0 699 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 C14orf178Q8N769 122 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 C9orf106Q8NAJ2 232 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 OR8G5Q8NG78 346 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 NEIL3Q8TAT5 605 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZFAND1Q8TCF1 268 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ACTRT1Q8TDG2 376 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RNASEH2CQ8TDP1 164 aaKnown RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 C17orf50Q8WW18 174 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 DNAJB3Q8WWF6 145 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 OR5P2Q8WZ92 322 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 DCUN1D4Q92564 292 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ANP32BQ92688 251 aaKnown RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 SEH1LQ96EE3 360 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RNF185Q96GF1 192 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 C1orf147Q96MC9 270 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZNF488Q96MN9 340 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 FAM210AQ96ND0 272 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RBBP8Q99708 897 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 PDCD1LG2Q9BQ51 273 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SULT4A1Q9BR01 284 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RSG1Q9BU20 258 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZNF426Q9BUY5 554 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SLC25A2Q9BXI2 301 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 COA1Q9GZY4 146 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 OR51B5Q9H339 312 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 DSN1Q9H410 356 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 PRORYQ9H606 182 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 UCK1Q9HA47 277 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ASCL3Q9NQ33 180 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 RRAGDQ9NQL2 400 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 SDHAF3Q9NRP4 125 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 TREX1Q9NSU2 369 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 NLE1Q9NVX2 485 aaPredicted RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 UVRAGQ9P2Y5 699 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 NAGKQ9UJ70 344 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SLC7A11Q9UPY5 501 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 MOKQ9UQ07 419 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ZNF257Q9Y2Q1 563 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 SNX24Q9Y343 169 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 USH1CQ9Y6N9 552 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms