RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ST6GALNAC5Q9BVH7 336 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 DPAGT1Q9H3H5 408 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 C14orf166Q9Y224 244 aaKnown RBP8.93□□□□□ -0.98
SMG6-213ENST00000573166 CHST2Q9Y4C5 530 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 DIRAS3O95661 229 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 IFNA7P01567 189 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 HPNP05981 417 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CTSSP25774 331 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 SEC61A1P61619 476 aaKnown RBP8.93□□□□□ -0.98
SMG6-213ENST00000573166 PYHIN1Q6K0P9 492 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 OR6K3Q8NGY3 331 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 RNF128Q8TEB7 428 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 BOD1Q96IK1 185 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 FUZQ9BT04 418 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 BEX1Q9HBH7 125 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ISYNA1Q9NPH2 558 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 FZR1Q9UM11 496 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 EDARQ9UNE0 448 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 NOTCH2Q04721 2471 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 THY1P04216 161 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 BLVRBP30043 206 aaPredicted RBP8.93□□□□□ -0.98
SMG6-213ENST00000573166 DDOSTP39656 456 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 SUCLG1P53597 346 aaKnown RBP8.93□□□□□ -0.98
SMG6-213ENST00000573166 AKIRIN2Q53H80 203 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 WDR38Q5JTN6 314 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 LGALS14Q8TCE9 139 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CCDC107Q8WV48 283 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 FAM3DQ96BQ1 224 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CLCC1Q96S66 551 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 JAM3Q9BX67 310 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 HAO2Q9NYQ3 351 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 AMDHD2Q9Y303 409 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CLDN16Q9Y5I7 305 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ZNF816-ZNF321PA0A0X1KG74 233 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 CD3EP07766 207 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 INHBBP09529 407 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 FXYD6P3P58550 94 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 P2RY6Q15077 328 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 SLC26A10Q8NG04 563 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 APH1BQ8WW43 257 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 KCTD12Q96CX2 325 aaKnown RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 ZNF486Q96H40 463 aaPredicted RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 SLC6A7Q99884 636 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 RGCCQ9H4X1 137 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 NDUFB11Q9NX14 153 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 PRSS50Q9UI38 385 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 TINAGQ9UJW2 476 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 MEIS3P1A6NDR6 274 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 TMEM229AB2RXF0 380 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 MCRIP1C9JLW8 97 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 PROB1E7EW31 1015 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 TRAF3IP2O43734 574 aaPredicted RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 ZNF780AO75290 641 aaPredicted RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 GPX5O75715 221 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 SLC34A2O95436 690 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 CST2P09228 141 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 CD53P19397 219 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 FAM27D1Q5T7N8 215 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 HAGHLQ6PII5 290 aaPredicted RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 ZDHHC23Q8IYP9 409 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 FBXL14Q8N1E6 418 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 OR56B1Q8NGI3 324 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 OR51F2Q8NH61 342 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 IL1F10Q8WWZ1 152 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 RAB40AQ8WXH6 277 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 C4orf45Q96LM5 186 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 TMEM100Q9NV29 134 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 POLDIP2Q9Y2S7 368 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 LIPGQ9Y5X9 500 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 PINLYPA6NC86 204 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 AQP7O14520 342 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 CYTIPO60759 359 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 RAMP1O60894 148 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 ZFPL1O95159 310 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 CPT2P23786 658 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 TNFSF8P32971 234 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 PRSS12P56730 875 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 FABP5Q01469 135 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 PCK2Q16822 640 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 LAIR2Q6ISS4 152 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 LAX1Q8IWV1 398 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 OR56B2PQ8NGI1 322 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 OR5H2Q8NGV7 314 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 SNX18Q96RF0 628 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 LIN7BQ9HAP6 207 aa8.92□□□□□ -0.98
SMG6-213ENST00000573166 LAMA2P24043 3122 aaKnown RBP8.92□□□□□ -0.98
SMG6-213ENST00000573166 SPRY3O43610 288 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 GLSO94925 669 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 PCMT1P22061 227 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 ST3GAL2Q16842 350 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 CLVS2Q5SYC1 327 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 ARHGEF39Q8N4T4 335 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 ZNF610Q8N9Z0 462 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 EMG1Q92979 244 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 TIMD4Q96H15 378 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 CMSS1Q9BQ75 279 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 BANF2Q9H503 90 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 OPA3Q9H6K4 179 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 TAS2R8Q9NYW2 309 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms