RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TBCCD1Q9NVR7 557 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PTTG3PQ9NZH4 202 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CRIM1Q9NZV1 1036 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CKLFQ9UBR5 152 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 STUB1Q9UNE7 303 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SSR3Q9UNL2 185 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC22A13Q9Y226 551 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 KMT2BQ9UMN6 2715 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SHANK1Q9Y566 2161 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 MPDZO75970 2070 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 LOC100506127A0A0U1RQW1 187 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 A0A1W2PPW3 197 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR4C45A6NMZ5 311 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 H3BSA7 217 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 H3BSH0 61 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 OGG1O15527 345 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PLPP2O43688 288 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 AIREO43918 545 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 TIMM8AO60220 97 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 FBXO24O75426 580 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 SRSF10O75494 262 aaKnown RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 DHRS3O75911 302 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ARL6IP5O75915 188 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZFPL1O95159 310 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PNPP00491 289 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 TTRP02766 147 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD1AP06126 327 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF35P13682 527 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 CALCRP30988 508 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 GNALP38405 381 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 LIPAP38571 399 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 WNT5AP41221 380 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 SOX2P48431 317 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 UCP2P55851 309 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 KLF3P57682 345 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 RPS25P62851 125 aaKnown RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PPP3R1P63098 170 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 TPBGQ13641 420 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 BLMHQ13867 455 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 KRTAP27-1Q3LI81 207 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF718Q3SXZ3 478 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 Q499Y3 187 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZMAT1Q5H9K5 638 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 NCMAPQ5T1S8 102 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 SHISA2Q6UWI4 295 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PAMR1Q6UXH9 720 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 SATL1Q86VE3 508 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 CLVS1Q8IUQ0 354 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PHC2Q8IXK0 858 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF101Q8IZC7 436 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PRSS35Q8N3Z0 413 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PAQR4Q8N4S7 273 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF485Q8NCK3 441 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 NUP37Q8NFH4 326 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 SEMA6DQ8NFY4 1073 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 KBTBD8Q8NFY9 601 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR13F1Q8NGS4 319 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR2AE1Q8NHA4 323 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM203Q969S6 136 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM106AQ96A25 262 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PGLYRP3Q96LB9 341 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF75AQ96N20 296 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PAPOLGQ9BWT3 736 aaKnown RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR2J1Q9GZK6 312 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 NEK6Q9HC98 313 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 ENPP5Q9UJA9 477 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 GSTK1Q9Y2Q3 226 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 NOP16Q9Y3C1 178 aaKnown RBP5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 CMAHPQ9Y471 501 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 BSNQ9UPA5 3926 aa5.68□□□□□ -1.5
CTDNEP1-204ENST00000570484 PLSCR5A0PG75 271 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 WIPF3A6NGB9 483 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 DHRS7CA6NNS2 312 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ANKRD30BLA7E2S9 258 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 C19orf84I3L1E1 186 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GABRPO00591 440 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GATBO75879 557 aaKnown RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 NGFP01138 241 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ISG15P05161 165 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 TFAP2AP05549 437 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GSTP1P09211 210 aaKnown RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 RNF224P0DH78 156 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 RAC2P15153 192 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 NR4A1P22736 598 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GADD45AP24522 165 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 TGFBR2P37173 567 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ALDH3B2P48448 385 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ERVS71-1P61550 626 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 RIPPLY1Q0D2K3 151 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GK2Q14410 553 aaPredicted RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 HLXQ14774 488 aaPredicted RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 SSX1Q16384 188 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 MOGQ16653 247 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 NKPD1Q17RQ9 610 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms