RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 FOXB2Q5VYV0 432 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CLEC18BQ6UXF7 455 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PAMR1Q6UXH9 720 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 UNQ6126/PRO20091Q6UXV3 157 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 MRPL21Q7Z2W9 205 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CLEC18CQ8NCF0 446 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 THRSPQ92748 146 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 RADILQ96JH8 1075 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 BCL7BQ9BQE9 202 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 SOX7Q9BT81 388 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 TXNL4BQ9NX01 149 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 USP9XQ93008 2570 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 H3BMQ9 156 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 SC5DO75845 299 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 GATBO75879 557 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CD2P06729 351 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CFL1P23528 166 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 RAD52P43351 418 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 UCP2P55851 309 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PRSS12P56730 875 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 VBP1P61758 197 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 NCS1P62166 190 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 BSPH1Q075Z2 132 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CTF1Q16619 201 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 CCDC54Q8NEL0 328 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 OR1J1Q8NGS3 322 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 DERL3Q96Q80 235 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 OPA3Q9H6K4 179 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 RNF167Q9H6Y7 350 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PLEKHA1Q9HB21 404 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 NOX4Q9NPH5 578 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 GSTK1Q9Y2Q3 226 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 SPEF1Q9Y4P9 236 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 hCG_38984A0A1B0GV85 526 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 A0A1W2PPK0 400 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 ABCD4O14678 606 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 CASKO14936 926 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 LMX1BO60663 402 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 MTRF1O75570 445 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 DHRS3O75911 302 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 RNF224P0DH78 156 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF12P17014 697 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF20P17024 532 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 FGF9P31371 208 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 TGFBR1P36897 503 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 PEX19P40855 299 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 ERVS71-1P61550 626 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 HSD17B12Q53GQ0 312 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 FAM27D1Q5T7N8 215 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 UNQ9370/PRO34162Q6UXP9 181 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 PGAP1Q75T13 922 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 PLPP7Q8NBV4 271 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 PHYHIPQ92561 330 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 TMEM106AQ96A25 262 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 SPSB4Q96A44 273 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 C12orf43Q96C57 262 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-219ENST00000570273 TRBV5-7A0A0A0MS05 114 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 C19orf84I3L1E1 186 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF701M0R085 212 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 ARL6IP5O75915 188 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 UCHL1P09936 223 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 EPXP11678 715 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 MYL9P24844 172 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 CALRP27797 417 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 KIR2DL3P43628 341 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 GSK3AP49840 483 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.283e-9■■■■■ 32.6
HERPUD1-219ENST00000570273 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 HLXQ14774 488 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 BEX5Q5H9J7 111 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 FGGYQ96C11 551 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 ORAI1Q96D31 301 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 DGCR14Q96DF8 476 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 OR2J1Q9GZK6 312 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF275Q9NSD4 429 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 V9GYS6 101 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 PRR14LQ5THK1 2151 aa13.28□□□□□ -0.28
HERPUD1-219ENST00000570273 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 WIPF3A6NGB9 483 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 GGT3PA6NGU5 568 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 SLC22A1O15245 554 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 GNALP38405 381 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 SERPINB10P48595 397 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 RPS23P62266 143 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms