RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PMS2P1A4D2B8 440 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 A8MV72 311 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM14DPA8MWL7 114 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 KIR3DP1A8MWS1 328 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 G3V3Y1 287 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 MASP2O00187 686 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 RAB27BO00194 218 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 TNFSF11O14788 317 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 RER1O15258 196 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LMX1BO60663 402 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CYTIPO60759 359 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ATP6V1G1O75348 118 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 NEURL1O76050 574 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR2A4O95047 310 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CD74P04233 296 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LPLP06858 475 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 RFPL3SP0C7P2 107 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 UBBP0CG47 229 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 AKAIN1P0CW23 69 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 PRF1P14222 555 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CPN1P15169 458 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 TCEA1P23193 301 aaKnown RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CD82P27701 267 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 NTF4P34130 210 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 DLSTP36957 453 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ID4P47928 161 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CX3CR1P49238 355 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF84P51523 738 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 PRKXP51817 358 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 NKX2-5P52952 324 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CLDN15P56746 228 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF121P58317 390 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ACTBP60709 375 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ACTG1P63261 375 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 SPOCK1Q08629 439 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 AIMP2Q13155 320 aaKnown RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 IKZF1Q13422 519 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 Q5BKY6 102 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM255AQ5JRV8 349 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 DCAF10Q5QP82 559 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ABHD17BQ5VST6 288 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CARD17Q5XLA6 110 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LAMTOR1Q6IAA8 161 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 MTFR2Q6P444 385 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 GLDNQ6ZMI3 551 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 UTS2BQ765I0 119 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LUZP2Q86TE4 346 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR5AS1Q8N127 324 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 FAM89BQ8N5H3 189 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 BVESQ8NE79 360 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR11H7Q8NGC8 314 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR8B12Q8NGG6 310 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR52N4Q8NGI2 321 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR4D6Q8NGJ1 314 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR14L1PQ8NHC6 308 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR51E1Q8TCB6 317 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CAPSLQ8WWF8 208 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 THOC3Q96J01 351 aaKnown RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 JSRP1Q96MG2 331 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 OR2A7Q96R45 310 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 SLC25A21Q9BQT8 299 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 RBM24Q9BX46 236 aaKnown RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 SRXN1Q9BYN0 137 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LINC00470Q9BZP3 86 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 C20orf85Q9H1P6 137 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 ATG5Q9H1Y0 275 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CNTD2Q9H8S5 307 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 GPR84Q9NQS5 396 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 DEPPQ9NTK1 212 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 FOXJ2Q9P0K8 574 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 LRFN1Q9P244 771 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 GHRLQ9UBU3 117 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 BOKQ9UMX3 212 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-213ENST00000569687 GTF2A1LQ9UNN4 478 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 POLR1DQ9Y2S0 133 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 V9GYS6 101 aa4.73□□□□□ -1.65
SF3B3-213ENST00000569687 RALGAPA1Q6GYQ0 2036 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FREM3P0C091 2139 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PINLYPA6NC86 204 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR6C6A6NF89 314 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 WIPF3A6NGB9 483 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR6C65A6NJZ3 312 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PROB1E7EW31 1015 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 H3BSH0 61 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 RPL36A-HNRNPH2H7BZ11 118 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TM4SF5O14894 197 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ST8SIA5O15466 376 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FABP7O15540 132 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TRAPPC6AO75865 159 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TNFSF15O95150 251 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 WDPCPO95876 746 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 HPXP02790 462 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ITGB2P05107 769 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF735P0CB33 412 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 VSIG8P0DPA2 414 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PTHLHP12272 177 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms