RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TBX18O95935 607 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HOXA5P20719 270 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 EPHA2P29317 976 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 NPBWR1P48145 328 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TCL1AP56279 114 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 LMAN2Q12907 356 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 LCN15Q6UWW0 184 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ZFP62Q8NB50 900 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SECTM1Q8WVN6 248 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 R3HDM4Q96D70 268 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ADGRG7Q96K78 797 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 NMNAT3Q96T66 252 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 NUDT22Q9BRQ3 303 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 OPN3Q9H1Y3 402 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ING1Q9UK53 422 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ATXN7L1Q9ULK2 861 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 NUP188Q5SRE5 1749 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 FCN1O00602 326 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 GPANK1O95872 356 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HNRNPA1P09651 372 aaKnown RBP eCLIP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 F3P13726 295 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HOXA11P31270 313 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 GABREP78334 506 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 OR8B8Q15620 311 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 DUSP5Q16690 384 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PRRT3Q5FWE3 981 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SPNS3Q6ZMD2 512 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ARIH2OSQ8N7S6 290 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 POM121Q96HA1 1249 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 IGSF21Q96ID5 467 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SGIP1Q9BQI5 828 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SLC23A2Q9UGH3 650 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PPP1R3CQ9UQK1 317 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 MRPS17Q9Y2R5 130 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 CROCCQ5TZA2 2017 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A0A0J9YY10 115 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TCRBV21S2A2A0A5A6 115 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 GEMIN2O14893 280 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TAPBPO15533 448 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 LEFTY1O75610 366 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TNFSF4P23510 183 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HRH1P35367 487 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SELENOPP49908 381 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SHHQ15465 462 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF100Q8IYN0 542 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SLC35E1Q96K37 410 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PRDM7Q9NQW5 492 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KCPQ6ZWJ8 1503 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 CHD1O14646 1710 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 FMN2Q9NZ56 1722 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KLRG2A4D1S0 409 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PRICKLE3O43900 615 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 C8AP07357 584 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HLA-GP17693 338 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 EIF3IQ13347 325 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 OR7A5Q15622 319 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SLC36A2Q495M3 483 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM251Q8N6I4 163 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 OR10G8Q8NGN5 311 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ABHD1Q96SE0 405 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 DEFB126Q9BYW3 111 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 GLIPR2Q9H4G4 154 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KLK11Q9UBX7 282 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 MRPL42Q9Y6G3 142 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 hCG_1809904A0A1W2PP81 198 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A0A1W2PR64 198 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A0A1W2PRV1 198 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HMGN4O00479 90 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 COCHO43405 550 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 CTAG2O75638 210 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 GYPBP06028 91 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KLK3P07288 261 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 MDH2P40926 338 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 POM121L1PQ3SYA9 428 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SLC39A5Q6ZMH5 540 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 LDLRAD3Q86YD5 345 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 AQP10Q96PS8 301 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PDCD1LG2Q9BQ51 273 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 HEYLQ9NQ87 328 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 OR7C2O60412 319 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 FBLP22087 321 aaKnown RBP6.44□□□□□ -1.38
CNOT1-216ENST00000569240 ENPP1P22413 925 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 IRS1P35568 1242 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 GPM6AP51674 278 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 HFEQ30201 348 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 C1QL4Q86Z23 238 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 OR5K2Q8NHB8 316 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 SCAMP4Q969E2 229 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 DERL3Q96Q80 235 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 TBX15Q96SF7 602 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 HRASLS2Q9NWW9 162 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 PSENENQ9NZ42 101 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 KDM3BQ7LBC6 1761 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 CCDC88AQ3V6T2 1871 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 G6PCP35575 357 aa6.44□□□□□ -1.38
CNOT1-216ENST00000569240 TGFBR1P36897 503 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms