RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ALPK2Q86TB3 2170 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 LOC101059948A0A1B0GTJ6 334 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 RNF222A6NCQ9 220 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 B4E171 279 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF878C9JN71 531 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 CDX4O14627 284 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF806P0C7X5 589 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 TSPAN7P41732 249 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 PPP1R1AQ13522 171 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF239Q16600 458 aaKnown RBP14.85□□□□□ -0.03
CMTM3-213ENST00000566756 ARSKQ6UWY0 536 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 PGAP1Q75T13 922 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 CD163Q86VB7 1156 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 ELP5Q8TE02 316 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 PPP1R1CQ8WVI7 109 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 BARX1Q9HBU1 254 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-213ENST00000566756 GPR160Q9UJ42 338 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 GPR179Q6PRD1 2367 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 MYO15AQ9UKN7 3530 aa14.85□□□□□ -0.03
CMTM3-213ENST00000566756 CEACAM18A8MTB9 384 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF354AO60765 605 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CD59P13987 128 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CASRP41180 1078 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF41P51814 821 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 IL13RA1P78552 427 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 KCNMB1Q16558 191 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CHST4Q8NCG5 386 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 NOXO1Q8NFA2 376 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 MRPS24Q96EL2 167 aaKnown RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 VRK1Q99986 396 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 MYEF2Q9P2K5 600 aaKnown RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 DBX1A6NMT0 343 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 TRIM77I1YAP6 450 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 EFSO43281 561 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 IGHG1P01857 330 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 KLK3P07288 261 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CCL4P13236 92 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CCL1P22362 96 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 FKBP2P26885 142 aaKnown RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF93P35789 620 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 STARP49675 285 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 BTN1A1Q13410 526 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF273Q14593 569 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 NKPD1Q17RQ9 610 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 PNLIPRP3Q17RR3 467 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 PLPPR5Q32ZL2 321 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 VAX1Q5SQQ9 334 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 LCN10Q6JVE6 187 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 TMEM17Q86X19 198 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 HOGA1Q86XE5 327 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 UEVLDQ8IX04 471 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 OR10K1Q8NGX5 313 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 THAP6Q8TBB0 222 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 NKD1Q969G9 470 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 CDC6Q99741 560 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 TMEM185BQ9H7F4 350 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 COQ3Q9NZJ6 369 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 PPP4R1LQ9P1A2 415 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 C19orf25Q9UFG5 118 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-213ENST00000566756 VDAC3Q9Y277 283 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 B3GALT1Q9Y5Z6 326 aa14.84□□□□□ -0.03
CMTM3-213ENST00000566756 ZNF318Q5VUA4 2279 aa14.83□□□□□ -0.03
CMTM3-213ENST00000566756 IGHV3-20A0A0C4DH32 117 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 CDK2AP1O14519 115 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 IFNA6P05013 189 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 PGA4P0DJD7 388 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 PGA3P0DJD8 388 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 ZNF20P17024 532 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 HRH1P35367 487 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 DLSTP36957 453 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 PRKXP51817 358 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 CYCSP99999 105 aaKnown RBP14.83□□□□□ -0.04
CMTM3-213ENST00000566756 TAF13Q15543 124 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 C17orf107Q6ZR85 190 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 CPEB2Q7Z5Q1 589 aaKnown RBP14.83□□□□□ -0.04
CMTM3-213ENST00000566756 CCDC36Q8IYA8 594 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 ARRDC1Q8N5I2 433 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 OR2AJ1Q8NGZ0 328 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 FBXW5Q969U6 566 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 WDR77Q9BQA1 342 aaPredicted RBP14.83□□□□□ -0.04
CMTM3-213ENST00000566756 CRB3Q9BUF7 120 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 PTGES2Q9H7Z7 377 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 LHFPL6Q9Y693 200 aa14.83□□□□□ -0.04
CMTM3-213ENST00000566756 TRBV6-7A0A0A0MS04 114 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 A0A0B4J2A0 478 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 LOC102725191A0A1B0GVB3 256 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 SSX5O60225 188 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 GDF9O60383 454 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 CNR1P21554 472 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 CX3CR1P49238 355 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 FOXL2P58012 376 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 CLRN1P58418 232 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 FOXK1P85037 733 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 MYBPHQ13203 477 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 PAN3Q58A45 887 aaKnown RBP14.82□□□□□ -0.04
CMTM3-213ENST00000566756 AWAT2Q6E213 333 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 SLC25A47Q6Q0C1 308 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 UQCC3Q6UW78 93 aa14.82□□□□□ -0.04
CMTM3-213ENST00000566756 C16orf47Q6ZP98 133 aaPredicted RBP14.82□□□□□ -0.04
CMTM3-213ENST00000566756 NAA40Q86UY6 237 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms