RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ARSKQ6UWY0 536 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CPEB2Q7Z5Q1 589 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 SUMF1Q8NBK3 374 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MS4A8Q9BY19 250 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ENPP4Q9Y6X5 453 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 LOC101059948A0A1B0GTJ6 334 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF736B4DX44 427 aaPredicted RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 CDRT1O95170 752 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ID1P41134 155 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF74Q16587 644 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 LHFPL2Q6ZUX7 228 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 OVCH1Q7RTY7 1134 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 TMEM18Q96B42 140 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ACER3Q9NUN7 267 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ALKBH4Q9NXW9 302 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PCDHGA9Q9Y5G4 932 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 TMEM238LA0A1B0GVL6 79 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SHISA3A0PJX4 238 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 FAM24AA6NFZ4 105 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 A6NJY4 79 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 M0QZK8 103 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SELENOFO60613 162 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CPNE6O95741 557 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 HRASP01112 189 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GAAP10253 952 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ADRA2CP18825 462 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PLAURQ03405 335 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 DYRK1AQ13627 763 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MRPL2Q5T653 305 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 ELP2Q6IA86 826 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PTRH1Q86Y79 214 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 FOXRED2Q8IWF2 684 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF619Q8N2I2 560 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 METTL4Q8N3J2 472 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CSNK1A1LQ8N752 337 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 LSMEM1Q8N8F7 131 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 OR6K6Q8NGW6 343 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PHOSPHO1Q8TCT1 267 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A18Q9H1K4 315 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ELL3Q9HB65 397 aaPredicted RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 M0R082 166 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CYTIPO60759 359 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 QDPRP09417 244 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PATE4P0C8F1 98 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SLC2A1P11166 492 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 OSMP13725 252 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ENPP1P22413 925 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 DLX5P56178 289 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SELENOWP63302 87 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CFHR1Q03591 330 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 BAXQ07812 192 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CRMP1Q14194 572 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PYDC2Q56P42 97 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 RNASE10Q5GAN6 216 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 TMEM69Q5SWH9 247 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ATAD3CQ5T2N8 411 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GPR137CQ8N3F9 429 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 APOBEC4Q8WW27 367 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 GPR82Q96P67 336 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GDF15Q99988 308 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SF3B5Q9BWJ5 86 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 TRAPPC4Q9Y296 219 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 URB1O60287 2271 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 M0R296 226 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRICKLE3O43900 615 aaPredicted RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 PPP1R3DO95685 299 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CD1AP06126 327 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ITGA5P08648 1049 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ELK1P19419 428 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRSS3P35030 304 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SOX2P48431 317 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MTCP1P56278 107 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 DCDP81605 110 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 HTR4Q13639 388 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 STEAP3Q658P3 488 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GALNTL5Q7Z4T8 443 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MAFIPQ8WZ33 124 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 FAM46BQ96A09 425 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 RAB3CQ96E17 227 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 TMEM56Q96MV1 263 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CHST11Q9NPF2 352 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 FBXL17Q9UF56 701 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CENPEQ02224 2701 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRSS37A4D1T9 235 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF587BE7ETH6 402 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MBTPS2O43462 519 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SMPD2O60906 423 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 RPL13AP40429 203 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 RNF212Q495C1 297 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 FAM71E1Q6IPT2 247 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 Q6ZRG5 221 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ARMC10Q8N2F6 343 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PLPP5Q8NEB5 264 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SP7Q8TDD2 431 aaPredicted RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 NKD1Q969G9 470 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 TNFRSF13CQ96RJ3 184 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 C20orf85Q9H1P6 137 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PPA2Q9H2U2 334 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 UBTD1Q9HAC8 227 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 TREM2Q9NZC2 230 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms